| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0969 |
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| Symbol | |
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| ID | 5538435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1273560 |
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| End bp | 1274210 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640893116 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001431099 |
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| Protein GI | 156740970 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.19098 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGACCG AGACATTCTT CAATCTGCCC GAGGAGAAGC GCGCCAGATT ACTCGATGTT
TTGCTCGACG AATTCTCGCA GAACGACTAC GACAATGTTT CCATCGGGCG CATCACGGAG
CGCGCTGGAA TCGCCAAAGG CAGTTTTTAC CAGTATTTTG CCGACAAGAA GGACTGCTAC
CTGTACCTCA TTCAGTTGGC CATCGAGGAG AAGACCACGT TTCTGCGCCG TCAACCGTCC
GAACCGTCAA CCGATCTGTT TGCGCACCTG CGCCGGTTGA TCGAGGCAGG GATGCAGTTT
CAGTTTCGCA ATCCGCGATT GGCGCACATC GCCTACAAAG CCCTGTTCGA TGATGCGCCG
CTGCCGGAAG AGACGCTGAA TGTCATCCGG CGTGGCGGTT ATGCCTACTT TCGCAGTCTG
GTCGAATCCG GCATCGCCAA TGGCTCGCTC GATCCCCGGA TCGACAGCGA TATTGCCGCA
TTTGTGCTTA ATGCCGTCTT TACCGAACTG GGTCAACATC TCATGCAACG TTTCGGCGTG
TTGCCGGACC AGTTACTCGT CAGCGGCGCG GATGCCTTCG ATCACGACGA CGTTCGCCGG
GCAATTCATC AGGTCATCAC CATTCTGGAA ACAGGACTCC GAAAGAAGTA A
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| Protein sequence | MPTETFFNLP EEKRARLLDV LLDEFSQNDY DNVSIGRITE RAGIAKGSFY QYFADKKDCY
LYLIQLAIEE KTTFLRRQPS EPSTDLFAHL RRLIEAGMQF QFRNPRLAHI AYKALFDDAP
LPEETLNVIR RGGYAYFRSL VESGIANGSL DPRIDSDIAA FVLNAVFTEL GQHLMQRFGV
LPDQLLVSGA DAFDHDDVRR AIHQVITILE TGLRKK
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