| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0960 |
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| Symbol | |
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| ID | 5538426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1267196 |
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| End bp | 1267906 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640893108 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001431091 |
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| Protein GI | 156740962 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0214647 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGA TTCTGGTTGT TGATGACGAG CCAGCGCTAC GCGATATGCT CCGGCTCTAT
CTCGAACAAG AAGGCTTCCA CGTCGTCGAA GCGGGCGACG GGAGGCGCGC GCTGTACGTG
GCGCGCGTCG AAAAACCGGA CCTGGTGATC CTTGACCTGA TGATGCCGGA AATGGGCGGG
TATGAATTCC TGCGCGCTTT CGCAAAAGAA TCGCGCACGC CGGTGATTGT GCTGACGGCA
AAGATCGAGG ACACCGACAA AATCCTGGGG CTGGAACTCG GCGCTGACGA TTATGTCACC
AAACCGTTCA ATGTGCGCGA GTTGATCGCC CGCATTCGCG CAGTTCTGCG TCGCACCCAG
CAGGCGCCGC TCGAACCGGA CGTGCTGCGC GCGGCTGATA TTGTGCTCGA CCGCACCGGG
CGGACGGTGC GCGTCGGTGG ACGATACATC GATCTCACAC CATCGGAGTT TGCCATTCTG
GCAACCCTCA TGGCGGCGCC GGGGCAGGTC TTCTCGCGGC TCGACCTGCT CGACCGCGTC
TCTGGCGATG CCTTTGAAGG CTCAGAGCGC ACGATTGATG TGCATATCCG CAACCTGCGC
GCCAAAATCG AAGACGATCC GCGCAATCCG CGCTATATTG AGACTGTATA TGGCATGGGG
TACCGCTTTG CGCTGCCGCG CACGCCGGAC CCGTCGAAGA CAGGCGCGTG A
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| Protein sequence | MSTILVVDDE PALRDMLRLY LEQEGFHVVE AGDGRRALYV ARVEKPDLVI LDLMMPEMGG
YEFLRAFAKE SRTPVIVLTA KIEDTDKILG LELGADDYVT KPFNVRELIA RIRAVLRRTQ
QAPLEPDVLR AADIVLDRTG RTVRVGGRYI DLTPSEFAIL ATLMAAPGQV FSRLDLLDRV
SGDAFEGSER TIDVHIRNLR AKIEDDPRNP RYIETVYGMG YRFALPRTPD PSKTGA
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