| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0944 |
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| Symbol | |
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| ID | 5538410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1250240 |
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| End bp | 1251592 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640893093 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001431076 |
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| Protein GI | 156740947 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000132586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.320448 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGTTCG AGATTTTTCG TTTTCATCCG CAAATTAACG CCGGTATCCG CGACCTCGGA
TACCACACGC CGACCCCAAT CCAGGAACAG GTCATTCCCC ACGCGCTGGC AGGTCGCGAT
GTGATCGGTA TAGCGCAGAC CGGCACCGGC AAAACGGCAG CGTTCGTGTT GCCGATTCTG
CACCATCTGA TGCGCGGCCC GCGTGGGCGT GTACGCGCCA TGATCGTAAC GCCGACGCGC
GAACTGGCGG AACAGATTCA GGGAGTCATT GAAGCGCTCG GCAAACACAC CGGCATTCGC
AGCGTCACGC TCTACGGCGG CGTCGGGTAT CAGGGGCAGA TCCAGCGCCT GCGGCGCGGC
GTCGAGATTG CCGTCGTCTG TCCGGGGCGA TTGCTCGACC ATCTGGAACG GGGAACCCTG
ACGCTCGACC ACCTTGAGGT GCTGACGCTC GACGAAGCCG ATCAGATGTT CGACATGGGC
TTTCTGCCTG ATGTCCGAAG GATTCTGCGT CTCGCGCCTG TGGAACGCCA GACGATGCTC
TTTTCGGCGA CGATGCCCGA CGCAGTGCGT TCGCTGGCGC GTGAGGCGCT ACGTGATCCG
CTGACGGTGC AGATCGGGCG CAGTGCGCCG GTTGCGACCG TCACCCACGC GATCTATCCG
GTTCCTGAGC ATCTGAAGAC ATCGCTGCTG ATCGAGTTAC TGGAACGCAC CGATGCCGAA
TCGGTGTTGA TCTTCACCCG CACGAAGCAT CGCGCGCAGC GCCTGGGCGA TACCCTGGCG
CGGCTGGGGT ATCGCGCAAC ATCGTTGCAC GGCAATCTGT CGCAGAACCG TCGCCAGGCG
GCTCTCGACG GGTTCCGCAG CGGTCGGTAC CAGATACTGA CGGCGACCGA CATCGCGGCG
CGCGGAATCG ATGTGGCGCG CATTTCGCAC GTGATCAACT ACGATATGCC GCAAACCGCC
GAGGCGTACA CGCATCGCAT CGGGCGCACC GGGCGCGCCG CGCGCACCGG CGATGCCTTC
ACCCTGGTGA CGCGCGGTGA TACTGCGATG GTGCGCGCAA TCGAACGATT GATCGGCGAG
CCGTTGAAGC GAGAGATCGT TCCGGGGTTC GATTACAACG CCGCTGCGCC GGTTCACGAA
ACCCGATCTG ATGCGGTCCA TTCCAATCGT CACACTGCCC CCCGCCATCA CGAAGCGCAT
CCTCACGCTG CGCCCCATGG CGCTGCACCC AGCCGCCGTC GCGCGTCCCG CGACCACGAT
ACGGGCGCGC GCCCGGCTCA TACACCCCGT ATAACGGGGA TGATGCGCAC CGAACGTCTT
GATCGCAGAG AGGCGCGACG CAGGCGAGAT TGA
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| Protein sequence | MSFEIFRFHP QINAGIRDLG YHTPTPIQEQ VIPHALAGRD VIGIAQTGTG KTAAFVLPIL
HHLMRGPRGR VRAMIVTPTR ELAEQIQGVI EALGKHTGIR SVTLYGGVGY QGQIQRLRRG
VEIAVVCPGR LLDHLERGTL TLDHLEVLTL DEADQMFDMG FLPDVRRILR LAPVERQTML
FSATMPDAVR SLAREALRDP LTVQIGRSAP VATVTHAIYP VPEHLKTSLL IELLERTDAE
SVLIFTRTKH RAQRLGDTLA RLGYRATSLH GNLSQNRRQA ALDGFRSGRY QILTATDIAA
RGIDVARISH VINYDMPQTA EAYTHRIGRT GRAARTGDAF TLVTRGDTAM VRAIERLIGE
PLKREIVPGF DYNAAAPVHE TRSDAVHSNR HTAPRHHEAH PHAAPHGAAP SRRRASRDHD
TGARPAHTPR ITGMMRTERL DRREARRRRD
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