Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0935 |
Symbol | |
ID | 5538401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1241138 |
End bp | 1242037 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640893084 |
Product | 6-phosphogluconate dehydrogenase-like protein |
Protein accession | YP_001431067 |
Protein GI | 156740938 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1023] Predicted 6-phosphogluconate dehydrogenase |
TIGRFAM ID | [TIGR00872] 6-phosphogluconate dehydrogenase (decarboxylating) [TIGR00873] 6-phosphogluconate dehydrogenase, decarboxylating |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.451456 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.176552 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATTG GCATCACTGG TCTTGGACGA ATGGGCGCAA ATATGGCGCG CCGGTGGCTG CGCGGCGGGC ACCGCGTTGT CGTTCACAAC CGCAGCCGTG GACCGGTTGA CGAACTCGCA ACTGCCGGGG CTGTTCCGGC ATACACGCTG GACGAATTGG TCGCCGCACT GAAGCCGCCA CGTGCAGTGT GGGTGATGCT GCCGGCCGGC GAGGTGACCG AACGCGCTAT CGTCGCACTC GCAAATCTCA TGGCGCCAGG CGACACGATT GTGGATGCTG GCAATACCAT GTACAAAGAC GATCTGCGAC GCGCAGAAGA ACTCAAAGCG CGCGGCATTT ATTATGTCGA TCAGGGAACG TCGGGCGGCA TCTGGGGATT AGAACTCGGC TACTGCCTGA TGGTCGGCGG CGACGCTGAT GTGGTCGCGC GGCTCGAACC GGCATTTCGC ACGCTCGCGC CGCAAGACGG TTATCTTCAC TGTGGACCGG TCGGCAGCGG TCATTTCGTC AAAATGGTGC ACAACGGCGT CGAGTATGGC ATGATGCAGG CATACGCCGA GGGATTTGAG ATTATGCGCT CCAAGACCGA GTTCAATCTT GATCTGCACA AAATTGCCGC TGTCTGGAAT CATGGGAGCG TTGTGCGGTC GTGGTTGCTG GAACTTGCGG AAGACGCCTT TCGGCAGGAC CCGCACCTCG AAAGCATTCA GGGGTATGTG GAAGACAGCG GTGAAGGGCG CTGGACGATT CAGACCGCGA TCGAACTCGA TGTTCCCGCA CCGGTGATCA CGCTATCGCT CTTTGAGCGT TTCCACTCCC GGAAACCGGA GTCGTTCGCC GCAAAAGTGC TGGCTGCACT CCGCAAAGGC TTTGGCGGTC ACCCCGTCAA GCCAGCGTGA
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Protein sequence | MDIGITGLGR MGANMARRWL RGGHRVVVHN RSRGPVDELA TAGAVPAYTL DELVAALKPP RAVWVMLPAG EVTERAIVAL ANLMAPGDTI VDAGNTMYKD DLRRAEELKA RGIYYVDQGT SGGIWGLELG YCLMVGGDAD VVARLEPAFR TLAPQDGYLH CGPVGSGHFV KMVHNGVEYG MMQAYAEGFE IMRSKTEFNL DLHKIAAVWN HGSVVRSWLL ELAEDAFRQD PHLESIQGYV EDSGEGRWTI QTAIELDVPA PVITLSLFER FHSRKPESFA AKVLAALRKG FGGHPVKPA
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