Gene Rcas_0914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0914 
Symbol 
ID5538380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1198488 
End bp1199297 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content63% 
IMG OID640893064 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001431047 
Protein GI156740918 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGTAG CCGAAACCCT TCCCGCCACC GAGCCATACG TGATTGCCGA CCGCGACGCG 
CGCGGCGTGG TGCGGCTGAC GCTGAACCGT CCGCGACAGT TCAACGCGCT CTCCGAAGAA
ATGCTCGCCG CGCTTCAGGC AGAACTCGAT GCCGTAGCCG CCGATCCGCA GGCGCGCGTG
GTAATCATCG CCGGGCAGGG CAAAGCCTTC TGTGCCGGAC ACGACCTGAA ACAGATGAGG
GCGAATTCCA GCCAGGAGTA CTACGAAGAA TTATTCGCCC GCTGCTCGCA GGTGATGCTG
ACGATCCAGC GCCTGCCACA ACCGGTGATC GCGCGTGTGC ACGGGATTGC CACGGCAGCC
GGGTGTCAGT TAGTCGCCAT GTGCGACCTG GCAGTCGCCG CAGAGGAGGC GACGTTTGCG
GTTTCCGGCA TCAACGTGGG GCTATTCTGC TCGACGCCAG GTGTGGCGCT GTCGCGCAAT
ATCGGGCGCA AAGCCGCCTT TGAGATGCTC GTCACCGGCG AGTTTATCGA CGCCCATACC
GCACAGGCGC TCGGACTGGT CAATCGCGTT GTGCCGGCCA CCGATCTCGA CGCCGAGGTG
CAGCGCCTGA CCGACGCCAT CGTCGCCCGA CCGGCGGAAG CGATTGCGAT CGGCAAGTCG
CTCTTCTACC GCCAGATCGA GATGGGGATT GCCGATGCCT ATCGGTTGGC GGGTGAGACG
ATGGCATGCA ACATGATGGA ACCATGCGCC CAGGAAGGGA TCGACGCTTT CATTGAAAAA
CGCCGTCCGG TGTGGGCGCC GGACAAATGA
 
Protein sequence
MQVAETLPAT EPYVIADRDA RGVVRLTLNR PRQFNALSEE MLAALQAELD AVAADPQARV 
VIIAGQGKAF CAGHDLKQMR ANSSQEYYEE LFARCSQVML TIQRLPQPVI ARVHGIATAA
GCQLVAMCDL AVAAEEATFA VSGINVGLFC STPGVALSRN IGRKAAFEML VTGEFIDAHT
AQALGLVNRV VPATDLDAEV QRLTDAIVAR PAEAIAIGKS LFYRQIEMGI ADAYRLAGET
MACNMMEPCA QEGIDAFIEK RRPVWAPDK