Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0897 |
Symbol | |
ID | 5538363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1173744 |
End bp | 1175912 |
Gene Length | 2169 bp |
Protein Length | 722 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640893047 |
Product | alpha-glucan phosphorylase |
Protein accession | YP_001431030 |
Protein GI | 156740901 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0058] Glucan phosphorylase |
TIGRFAM ID | [TIGR02094] alpha-glucan phosphorylases |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.853827 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGATG GGGTCAAGGA GGCGTCCTTG AGTATCAGAA GCGCCGATTT ACTCTTTACA CCGATTCCTG AGCGGATCGC CCGTCTCCGC GATCTGGCGT ACAACCTGTG GTGGAGTTGG CATCCCGAAG CGCAGGATCT CTATCGCCAC ATCGACGCTG ACCTGTGGGA GGAGGATCAT CACAATCCGG TCGATTTCCT GCGCGATGTG CGCCAGCGCA AACTCGAAGC CGCCGCCGCC GATCCGGCGT ATCTGGCGAA GTACGACCAG GTGATGGCGG CGTTCGACCG GTACATGGCG GCTGAGGACA CCTGGTACCG CCGCACCTTC GGCAATGGCA ACGGCAACGA TGTGATGATC GCCTATTTCT CGGCGGAGTT TGGTCTTCAC GAGTCATTGC CGATCTATTC AGGCGGTCTT GGCGTTCTGG CAGGCGATCA CGTAAAAGAG GCGAGTGATC TGGGGTTGCC GTTCGTTGCC GTTGGATTTA TCTACCCACA AGGATACTTC CGGCAGCGGT TGGATCCGAG CGGTTGGCAG GAGGCGATCT ATTCTAAATT GAATTTCGCC GATATTGCGG CAACGCAGGC GCTGACTGCC GACGGGCGCG AGGTGGTCGT CGAGGTCGAT CTGCCCGGTC GCGCGATCTA TGCCAAGGTG TACCGCATCC AGGTTGGGCG GGTGTCGCTG TTCCTGATGG ACACGGACAT TCATCCGAAC AGTCCGCAAG ACCGCGAACT GTCGGCGCGT CTGTACGGCG GCGACCAGGA AATGCGCATT GCGCAGGAAA TTGTTCTGGG CATTGGCGGG GTACGCGCAC TGCGTCAACT TGGTATTCAC CCGAACGTCT GGCACATGAA TGAAGGGCAC TCGGCGTTCC TGGTGCTCGA ACTGGTGCGC GAGCAGGTCG CGCAGGGCAT GCCGTTCGAT GAGGCATGGC GCGAAGTGCG CGCACAGTCG GTCTTCACCA CGCACACACC GGTGCCGGCG GGCAATGATG CCTTCCCGCT CCACCTCATA GAGAAGTACT TTGGGTCGTT CTGGACCCAA CTCGGACTGA CGCGCGAGCA ATTCTTCGCT ATTGCGCTGC AACATCAGCA GTGGGGACCA ACGTTCGCCA TGACCGTGCT GGCGCTGAAG GGATCGCATG TGCACAATGG CGTAAGTAAA CTGCACGGTC ATGTGGCGCG CGGCATGTGG CACTGGCTCT ATCCAGGCAC AGCGCAGGAT GAGGTGCCGA TCACCTCGAT CACGAACGGC ATCCACAGCA GCACGTGGCT GGCGCCTGCG ATGCGCCGCC TGTACGATGC GGCGCTTGGC CCCGATTGGG AAGCGGACCT CGACAATGTC GCCCGCTGGG AGAAGGTGCG AGACATTCCC GACGATCAGT TATGGGAGAC GCGACAGGCG TTGAAACGCG ATCTTGTCAT GCTGGCGCGT GAACGTGTTC GCCAGCGTCA TCTGCGGTTG GGATCACCAC CGCAGGTCTG GCCCGTGCTC GACGAGAAGA TTCTCACGAT TGGCTTTGCC CGCCGGTTTG CCACCTACAA GCGCGCCACG CTGCTGTTTC GCGAGCCGGA GCGTCTCAAG GCGTTGCTCA ATCGCAGCGA CCGGCCCGTG CAGATTATTT TTGCGGGCAA AGCGCATCCG GCAGACGATC CGGGGAAACA GTTCATCCAG CAGGTTTATC AGATGTCGCA GCAACCTGGA TTTCTTGGGC GCATTCTGTT CGTTGAGGAA TATGATATGG CCCTGGCGCG TGCGCTGGTT CAGGGGGTGG ATGTCTGGCT CAACACGCCG CGGCGCCCAT ATGAGGCAAG CGGCACCAGC GGGCAGAAGG CGGGGCTGAA TGGCGTCGTC AATGTCAGCA TCCTCGACGG TTGGTGGCCC GAGGCGTACA ACGGCAAGAA CGGCTGGGCA ATCGGCGAAG AGCGTGAGTA CAGCAATCAG GACGAGCAGG ACTGGCACGA CTCGCAGCAT CTCTACCGTA TTTTGGAGCA GGAAGTCATT CCGACGTATT ACGACCGGGG ACCTGACGGT ATCCCGCACC GGTGGCTGGC AATTGCAAAA GAATCGATTG CCACCATTGC GCCGGTATTC AGCACCCGCC GCATGGTCAA GGAGTACGTC ACGCGGTTGT ACCTGCCGGT GGCAGAAATA CAGGCGTAG
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Protein sequence | MADGVKEASL SIRSADLLFT PIPERIARLR DLAYNLWWSW HPEAQDLYRH IDADLWEEDH HNPVDFLRDV RQRKLEAAAA DPAYLAKYDQ VMAAFDRYMA AEDTWYRRTF GNGNGNDVMI AYFSAEFGLH ESLPIYSGGL GVLAGDHVKE ASDLGLPFVA VGFIYPQGYF RQRLDPSGWQ EAIYSKLNFA DIAATQALTA DGREVVVEVD LPGRAIYAKV YRIQVGRVSL FLMDTDIHPN SPQDRELSAR LYGGDQEMRI AQEIVLGIGG VRALRQLGIH PNVWHMNEGH SAFLVLELVR EQVAQGMPFD EAWREVRAQS VFTTHTPVPA GNDAFPLHLI EKYFGSFWTQ LGLTREQFFA IALQHQQWGP TFAMTVLALK GSHVHNGVSK LHGHVARGMW HWLYPGTAQD EVPITSITNG IHSSTWLAPA MRRLYDAALG PDWEADLDNV ARWEKVRDIP DDQLWETRQA LKRDLVMLAR ERVRQRHLRL GSPPQVWPVL DEKILTIGFA RRFATYKRAT LLFREPERLK ALLNRSDRPV QIIFAGKAHP ADDPGKQFIQ QVYQMSQQPG FLGRILFVEE YDMALARALV QGVDVWLNTP RRPYEASGTS GQKAGLNGVV NVSILDGWWP EAYNGKNGWA IGEEREYSNQ DEQDWHDSQH LYRILEQEVI PTYYDRGPDG IPHRWLAIAK ESIATIAPVF STRRMVKEYV TRLYLPVAEI QA
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