| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0889 |
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| Symbol | |
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| ID | 5538355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1163700 |
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| End bp | 1165382 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640893040 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001431023 |
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| Protein GI | 156740894 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0278278 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGACC ATCCATGGCT CGCCTTCTAT GATCCTGGCG TTCCTGCCGA GATCACGGCG
CCGGAATGCA TCCTGCCCGA TCTGCTCGCC ACAGCGGCAC ACGCATATCC GGCAGCGCCG
GCAATACTGT TCTACGGGCG CGTCGTCAAC TATGCCACCC TTGATCGCCT GGCAACACGT
TTTGCCGTCG CACTGCTGAA ATCGGGTGTG CAACCCGGCG AACGCATCGC GCTGGTGTTA
CCGAACATTC CACAGGCGGT CATTGCCTGC TACGGCGCGT GGCGCGCGGG GGCGATCGTA
GCATTGACCA ACCCCATCTT CGAGGCGGGA GGTCTGGTGC GCCAGTTGAC CGATGCAGGC
GCAACAACGC TGATTGCATT GAGCATGTTC CACCCGCTGG TTGTGGCAGT GCGCGAACGC
GCTGGCGTGC AACGGGTTAT CTACACCAAT CTGAAGGAGT TTCTGCCGCC AGGGCAGCGA
CGTTTATTTA CGCTTCTGCG CCAGGAACGC GAAGGACACC GCGTTCCCGA TGATGAGGCG
CGCCGGGCGC TCTGGATGGC GCACATGCTG GCAGAAGAGC CGGGGGACTC CCTTCCTCAG
ACGAGTCCTG GCAAACCGGC GACAATTCTG TACACTGGCG GCACGACCGG CGAGGCAAAA
GGGGTCGTCC ATACGCATCG CAGCCTGGTC GCCAACGCAG TGCAGGTGGC GGCATGGCTC
CCTGCGGCGC GCCGCGGCAC GGAACGGGTG ATCTGCGCGC TTCCGTTTTC CCACGCCTAT
GGCATGACCG CCTGCATGAA CTTTTCGGTG GCGATTGCTG CCGCCATGAT CCTGCTGCCA
ACGTTCGAGA CCGGCAATGT CCTGCACGCC ATTCGCCGCG AGCATGCGAC GATCTTCCCC
GGCATTCCGC CCATGTATGC CGCAATTGCT GAGATCAAGG ACGCGCGGCG ATATGGTCTG
GCGTCACTGC GCGCCTGCAT TAGCGGAGCT GCACCGTTGC CCATTGAAGT GCAGGAGGGG
TTCGAGCGCG TCACCCGCGC CCGTCTCGTC GAAGGATATG GGTTGACCGA AGCCGGTCCG
GTGACGCACG CCAACCCGCT GGGCGTATCA CACGAGCGCC GCGCGACGAT TGGCATTCCG
CTGCCATCGA CCGAAGCGAA GATCGTCGAT GCGACAACCG GCGCCGACCT GCCGCCGGGA
CGCATCGGCG AACTGCTGGT GCGCGGACCA CAGCTCATGC AGGGGTACTG GAATCGCCCG
GTTGATACTG CGGAAGTCTT CACATCAGAT GGCTGGCTGC GCACCGGCGA CATGGCGCGT
ATGGACACTG ATGGCTTTTT TCAGATCATC GAACGGAAGA AAGATGTCAT TATCGCCGGT
CCGTACAACA TCTATCCGCG CGACATTGAG GAAGTGCTTT ATCAGCACCC CAAGGTGCTG
GAGGCAGCGG TTGCCGGCGC TCCTCGTGCT GAAGGACAAC CCGATCTGCG CGCATTCGTC
GTGTTGCGGC AGGGAGAGCG CGCCACCGCC GATGAAATCA TTGGGTTCCT CCGCGAGCGC
CTGAGCGCGC ACAAGGTGCC GTCAGTCGTC GAGTTTCGCG ATGCGTTGCC GCGTTCGTTC
ATCGGCAAAG TGTTGCGGCG CGCGCTGCTC GATGATCGCT CCGAACACAG CGATCGGGGT
TGA
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| Protein sequence | MPDHPWLAFY DPGVPAEITA PECILPDLLA TAAHAYPAAP AILFYGRVVN YATLDRLATR
FAVALLKSGV QPGERIALVL PNIPQAVIAC YGAWRAGAIV ALTNPIFEAG GLVRQLTDAG
ATTLIALSMF HPLVVAVRER AGVQRVIYTN LKEFLPPGQR RLFTLLRQER EGHRVPDDEA
RRALWMAHML AEEPGDSLPQ TSPGKPATIL YTGGTTGEAK GVVHTHRSLV ANAVQVAAWL
PAARRGTERV ICALPFSHAY GMTACMNFSV AIAAAMILLP TFETGNVLHA IRREHATIFP
GIPPMYAAIA EIKDARRYGL ASLRACISGA APLPIEVQEG FERVTRARLV EGYGLTEAGP
VTHANPLGVS HERRATIGIP LPSTEAKIVD ATTGADLPPG RIGELLVRGP QLMQGYWNRP
VDTAEVFTSD GWLRTGDMAR MDTDGFFQII ERKKDVIIAG PYNIYPRDIE EVLYQHPKVL
EAAVAGAPRA EGQPDLRAFV VLRQGERATA DEIIGFLRER LSAHKVPSVV EFRDALPRSF
IGKVLRRALL DDRSEHSDRG
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