| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0881 |
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| Symbol | |
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| ID | 5538347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1152602 |
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| End bp | 1155358 |
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| Gene Length | 2757 bp |
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| Protein Length | 918 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640893032 |
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| Product | aconitate hydratase |
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| Protein accession | YP_001431015 |
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| Protein GI | 156740886 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1048] Aconitase A |
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| TIGRFAM ID | [TIGR01341] aconitate hydratase 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00100321 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCAACC TCAACGATCC ATTCAACGCT CGCGCGCCGC TGGTGGTCGG CGGGCAGACA
TTCATCATCT ACCGGCTCGA CGCACTGGCG CGGCGCGTCG GCGCCGACCT TGCGCGGCTG
CCGTTTTCGG TCAAAGTGTT GCTGGAAGCG CTCCTGCGCA ATGTCGGCGA TGGCTTCACC
ACCATCGACG ATGTGGCGGC GCTGGCGCAG TGGACCCCGG CGAGCGCCGG GCAGCGCGAG
GTGGCGTTCA AACCGGCGCG TGTGCTGATG CAGGATTTCA CCGGCGTTCC GGCGGTTGTC
GATCTTGCAG CAATGCGCGA TGCGATGGCG CACCTGGGAG GCGATCCGGC AAAGATCAAT
CCGCTCGTTC CGGCAGACCT GGTGATCGAC CACTCGGTGC AGGTCGATGC TTTTGGTCAC
GGCATGGCGC TGGTGCTGAA CGCTCAACTC GAATTCGAGC GCAACCGTGA ACGCTATGAA
TTCCTGCGCT GGGGGCAGCA GGCGTTTGCG AACTTCCGGG TCGTGCCTCC GGCGACCGGC
ATCTGCCATC AGGTCAACCT CGAATACCTG GCGACGGTGG TGATGACTCG CGAGATCGAC
GGTGAACTGG TCGCCATGCC GGATACCCTG GTCGGCACCG ACAGTCACAC GACGATGATC
AACGGACTGG GGGTGCTTGG CTGGGGTGTT GGCGGCATCG AAGCCGAAGC CGTGCTCCTG
GGGCAGCCGC TGGCGATGCT GACGCCGGAG GTCGTCGGGG TGAAATTGAC CGGCGCGTTG
CGCCCCGGCG CAACCGCAAC CGATCTGGTG TTGCGCGTGA CCGAGATGCT GCGCAGGCAC
GGCGTGGTGG ATAAGTTCGT CGAGTTCTGC GGTCCCGGTT TGAGCGCGCT CAGCCTGGCG
GATCGCGCGA CGATTGCGAA CATGGCGCCG GAGTATGGCG CAACCTGCGG TTTCTTCCCG
GTTGACGCCG AAACGCTTGC CTACCTGCGC GGCACCGGTC GCTCCGACGA CCTGGTGGCG
CTGGTTGAGG CGTATTGCCG CGAACAGGGG CTGTTCCGAA CCGACGACTC ACCAATCCCG
GAGTTCAATA CCCTGCTCGA ACTCGACCTG AGCACCGTCG AGCCGAGCGT TGCCGGTCCG
CGCCGTCCGC AAGACCGTGT GCCGCTTACC GATCTCAAGG CGTCGTTCAA CCAGGCGATG
CGGACGATCT TTGGGCGCGA GGCGCCAGCC TACGAAGGGA ATGGCGAGCG TCGGCGCGAG
CGCCGCGATC TGTATGCGGC ATCGCGTGTA CCGGTGACGC TGAACGGGCA GGCAACCGCA
CTCACCCACG GCTCGACGAT CATTGCCGCG ATTACGTCTT GCACCAACAC CTCGAACCCG
TCGGTGATGA TTGCCGCCGG ATTGCTGGCG AAGAAGGCGG TCGAGAAAGG GTTGCGCGTG
CCGCCCTATG TGAAAACCAG CCTGGCGCCG GGATCGCGCG TCGTCAGTGA GTACCTGGCG
CAGTCCGGCT TGCAGGAATA TCTCGACCAG TTGGGGTTCA ACGTCGTCGG GTACGGATGT
ACGACCTGTA TTGGCAACAG CGGTCCGGTC GCCGACGAGA TCGCGCAGGC GGTCAAGGCG
GGCAACCTGG TGGTCAGCGC CGTGTTGAGC GGCAACCGCA ACTTCGAGGG GCGCATCAAC
CCGGTGGTGC GCGCCAACTA CCTGGCGTCG CCGCCGCTGG TCGTCGCCTG TGCGATTGCC
GGCACGGTGG ACATCGATAT GAACCGCGAG CCGCTTGGCG TCGGGATTGA TGGCGAGCCG
GTCTACTTGG CGGACATCTG GCCCTCTGCG GAAGAAGTCG CTGAGGTCAT GGCGGCGTCG
CTCAATGCCG ACCTGTTCCG CCAGCAGTAT GCCAATGTCT TCACTGGCAA CGAGACCTGG
AATGCCATTC CGGTGAGCGG CGGCGACCTG TATGCCTGGA ACCCCGACTC GACCTACATC
CAGAACCCCC CATATTTCCG CGATATGACG CGCGAGGTTC CGCCGCTGGC ATCTATCCGG
GGGGCGCGGG CGCTGGCGTT GCTGGGTGAC AGTGTGACAA CCGACCATAT CTCGCCAGCG
GGGAGCATTG CCAAAGATAG TCCGGCGGGG CGGTACCTGA TCGAGCGCGG CGTGCAACCG
GCAGATTTCA ACTCGTATGG CGCGCGGCGC GGCAACCACG AGGTGATGAT GCGCGGCACG
TTCGCCAACA TCCGTCTACG CAATGCCATG GTTCCCGGTG TGGAGGGCGG CTACACGATC
TACCTGCCGA CCGGTGAGCA GATGAGCATC TACGATGCGG CGATGCGCTA CCAGGCGGAC
GGCACGCCGC TCGTGGTACT GGCGGGCAAG GAATACGGAA CCGGTTCCTC GCGCGACTGG
GCGGCAAAGG GAACGTTCCT GCTCGGCGTG CGCGCTGTGA TCGCCGAGAG TTTTGAGCGT
ATTCACCGCT CGAACCTGGT GGGCATGGGG GTGCTGCCGT TGACATTTGC GCCGGGCGAA
AGCTGGCAGT CACTCGGTAT CACCGGGCGC GAAATCTTCA CAATCGAGGG CATTGAAACA
TTGCGTCCCG GACAGGAATT GACCGTGCAT GCACAGCGTC CTGATGGTTC AGCATTCACA
TTCACGGTAA AGGCGCGGAT CAATTCCGAA GGCGAACTCG CATACTACCG GAATGGCGGC
ATTCTGCACT ACGTGCTGCG CCAGCTGGCG GAACAGGAAG AGCCGGCGGC GGTGTGA
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| Protein sequence | MTNLNDPFNA RAPLVVGGQT FIIYRLDALA RRVGADLARL PFSVKVLLEA LLRNVGDGFT
TIDDVAALAQ WTPASAGQRE VAFKPARVLM QDFTGVPAVV DLAAMRDAMA HLGGDPAKIN
PLVPADLVID HSVQVDAFGH GMALVLNAQL EFERNRERYE FLRWGQQAFA NFRVVPPATG
ICHQVNLEYL ATVVMTREID GELVAMPDTL VGTDSHTTMI NGLGVLGWGV GGIEAEAVLL
GQPLAMLTPE VVGVKLTGAL RPGATATDLV LRVTEMLRRH GVVDKFVEFC GPGLSALSLA
DRATIANMAP EYGATCGFFP VDAETLAYLR GTGRSDDLVA LVEAYCREQG LFRTDDSPIP
EFNTLLELDL STVEPSVAGP RRPQDRVPLT DLKASFNQAM RTIFGREAPA YEGNGERRRE
RRDLYAASRV PVTLNGQATA LTHGSTIIAA ITSCTNTSNP SVMIAAGLLA KKAVEKGLRV
PPYVKTSLAP GSRVVSEYLA QSGLQEYLDQ LGFNVVGYGC TTCIGNSGPV ADEIAQAVKA
GNLVVSAVLS GNRNFEGRIN PVVRANYLAS PPLVVACAIA GTVDIDMNRE PLGVGIDGEP
VYLADIWPSA EEVAEVMAAS LNADLFRQQY ANVFTGNETW NAIPVSGGDL YAWNPDSTYI
QNPPYFRDMT REVPPLASIR GARALALLGD SVTTDHISPA GSIAKDSPAG RYLIERGVQP
ADFNSYGARR GNHEVMMRGT FANIRLRNAM VPGVEGGYTI YLPTGEQMSI YDAAMRYQAD
GTPLVVLAGK EYGTGSSRDW AAKGTFLLGV RAVIAESFER IHRSNLVGMG VLPLTFAPGE
SWQSLGITGR EIFTIEGIET LRPGQELTVH AQRPDGSAFT FTVKARINSE GELAYYRNGG
ILHYVLRQLA EQEEPAAV
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