Gene Rcas_0875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0875 
Symbol 
ID5538341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1143785 
End bp1144630 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content47% 
IMG OID640893026 
ProductDNA methylase N-4/N-6 domain-containing protein 
Protein accessionYP_001431009 
Protein GI156740880 
COG category[L] Replication, recombination and repair 
COG ID[COG0863] DNA modification methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000314247 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000054829 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGACGGGCG ATACCACGAC CACCAGACTC AACCAGATCA TTCATGCGGA TTGTTTGCAG 
GAGCTGGCGT TCTTGCGGGA TGAATCGATT GATCTTACCC TCTTCTCGCC GCCATACGAT
GGGATCAGAG ATTACAAAAA GAACTGGTCA TTCGATTTTT CTATGCTGGG TCGCCAACTG
TATCGTGTGA CAAAGGATGG AGGGGTTGCA ATTGTTGTCA TCGGCGATGG AACGAAGCAA
TTCGCAAAAT CTCTGACTTC GTTTCGCCTC GCCGTCAATT GGGTTGATGA GGTTGGCTGG
AAACTGTTCG AGTGCGTCAT TTACCATCGC GATGGAAACC CAGGCGCCTG GTGGACGCAG
CGTTTTCGAG TCGATCACGA GTATGTTCTC ATTTTTTTTA AAGGAGAACG ACCAAAAACA
TTCCAAAAGG ATCACCTCAT GATACCGAGT AAACATGCAG GAAAGATATA TTCAGGTACC
GATCGGCTCA CAAACGGTGG ATTCAAGCGA ATAACTCCCA AAGCAGTTAA TCCAATGAAA
TGTCGCGGAA CTGTCTGGCA GTATGCAACC AGTAATACCG AAGGGAATCG TCTCAAACTG
CTTCATCCTG CAACATTTCC GGACAAACTA GCGGAAGACC TGATCCTCTG CTTCTCACAA
CCTGGAGACA TTGTGCTCGA TCCGATGTGC GGAAGTGGAA CAACTTGCGT TGTAGCGCGG
AATAACAATC GAAAGTATAT TGGAATAGAG ATTAGCCAGG AATATTGCGA GATCGCAAGA
AAACGAATCG AAAAGGAGTT TCAAAACGTG GAGCAGCGTA CAATGTTCCA GGAGGACTCG
TTGTGA
 
Protein sequence
MTGDTTTTRL NQIIHADCLQ ELAFLRDESI DLTLFSPPYD GIRDYKKNWS FDFSMLGRQL 
YRVTKDGGVA IVVIGDGTKQ FAKSLTSFRL AVNWVDEVGW KLFECVIYHR DGNPGAWWTQ
RFRVDHEYVL IFFKGERPKT FQKDHLMIPS KHAGKIYSGT DRLTNGGFKR ITPKAVNPMK
CRGTVWQYAT SNTEGNRLKL LHPATFPDKL AEDLILCFSQ PGDIVLDPMC GSGTTCVVAR
NNNRKYIGIE ISQEYCEIAR KRIEKEFQNV EQRTMFQEDS L