| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0865 |
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| Symbol | |
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| ID | 5538331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1131530 |
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| End bp | 1133560 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640893016 |
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| Product | hypoxanthine phosphoribosyltransferase |
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| Protein accession | YP_001430999 |
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| Protein GI | 156740870 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
[COG0634] Hypoxanthine-guanine phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01203] hypoxanthine phosphoribosyltransferase
[TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain
[TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000888188 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCTCAC TCGTCGACAG TGTGCGTGCA ATGCTCCGCC GCTATCGGAT GATTATGCCC
GGCGCACCGG TGGTCGTTGC GGTCTCCGGC GGACCGGACT CGCTCTGCCT GCTGGATGCG
CTTGTCCATC TGCGCGACGA TCTTGCATGT GATCTGCACG TGGTTCACCT CGATCACCGG
TTGCGCGGCG CGGAAGCGGC GGCGGAGGCG GCGTTCGTGG CGGAAACGGC GGCATGCCTG
AACCTGCCCT GTACGGTCGA AGCAGTCGAT GTACGGGCGC TGGCGCTGGA GCGCAATCTC
AACCTGCACG CTGCGGGGCG TCTGGCGCGC TACCGGTTGC TGGCGCGCGT GGCGCTGACG
ATTGGCGCGC AGGCGGTTGC AACGGCGCAC CACGCCGATG ATCAGGCGGA AACAGTGCTG
CTGCACCTGG TGCGTGGCGC GGGAGTCGCA GGTCTGCGCG GCATGCGCCC GGTCGTTGCA
TGGGAAGAGT GGCGCACTTT TGCGGGCGAC CCATCGCTGC AAGCGGATCA TCTGCGCCCA
CGTCTCATCC GTCCGCTCCT GGACGTGCCG CGCGCCAGGA TCGAGGCGTA CTGCACCGAA
CGCGGTCTCA CGCCGCGCCG CGACCCCTCG AATGCTGATC GCCGCTATCT GCGGACGCGC
ATTCGACAGG ATGTGCTTCC GGTGCTGACG GCATTGAACC CGCAGATTGC AACGGCGCTG
GGACGAACAG CGGCGGATTG CGCCGAAGTC GCCGATTTTC TTGAGCAGGA ACTGGATAGG
GCGTGGCTGA CGCTGGTTGT TGCGCGGGCG AACCGCATCG TGTTCGATGG TCGCCGCTGG
CGCGACCTGC CTCCGGCGCT TCAGCACGCG GCGTTGCGTC GCGCGTATGC GCTGCTTGGC
GGCAGCGACA CGCTCGGACG CGACGATGTG GTGCGCGCCT GCGACGCGGT CGGACGCGGC
GTGGGGAAGC GGATCGAACT GCCCGGCGGC GTTGCGCTGG TGACCGATTA CGATGGCGGA
TTTGCGCTCA TGCGCGGCGA CGCGCCGCCG GGGGATGGGG TCCGTCTTCC GGTGGCGGAA
ATGACCCTGA CGGTTCCCGG TTGCGTCGAA CTGAGCGATG GGCGCGCGCT CTGCGCCGAT
TATTGCCCGG CGGCCATGCC GACAAGCCGC TGGGATGTCT TTCTTAACGC CACAGTCTGC
CCCTCGCCGC TCACGGTGCG CTGGCGGCGC CCCGGCGACC GGATGCGTCT GGAGGGAGGA
CGTGGTTCCC GCCGCTTGCA GGATATCATG GTCGATGCGC GCGTGCCGCG TCTGTGGCGC
AGCACATGGC CGATTGTCGT TTCTGGCGAA CAGATTGTCT GGGTTCCCGG CGTGGGTGTG
GCGGAGGGGA TGCACGCCAT GATCGGGCAA CCGGCGCTTC ATCTATGGAT CGAAGGGATG
ACCGGCGTGG ACGTAGCGAT GGGCATTGAA AGGGAGCATT CCATGCACGA TGATATGGCA
AAAATCCTGA TCACAGCCGG GCAGATTCAG GAGCGGGTGC GCGCATTGGG TGCGCAGATC
ACGGCAGACT ATCGCCCGCT CGGCGATCTG TTGCTGGTGG GAGTGTTGAA AGGGTGCGCG
ATGTTTATGG TCGATCTGGC GCGCGCCATC GATATGCCGC TGGCGATGGA CTTTATCGCC
ACCTCGAGTT ATGGCAAAAC GACCGAGTCG AGCGGCGTGG TGCGCATGCT GAAAGACCTG
GATACGGATA TTGCCGGACG ACACGTCGTG ATCGTCGAAG ACATCATCGA CAGCGGGCTG
ACGCTGGCAT ATCTGCGCGG GCATCTGCTG CGGCGCAATC CGGCAAGTCT GCGTATCTGC
GCGCTGCTCA ACAAACCGTC GCGCCGTCGC GCCGACATTC CGATCGACTA CCTGGGGTTC
GATATTCCCA ATGAGTTCGT CGTCGGCTAT GGTCTTGATT TTGACGAAAA GTACCGCAAC
CTGCCCTATA TCGGTGTGCT GCACGAGCGC ATCTACCATT CGACGGCGTA A
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| Protein sequence | MASLVDSVRA MLRRYRMIMP GAPVVVAVSG GPDSLCLLDA LVHLRDDLAC DLHVVHLDHR
LRGAEAAAEA AFVAETAACL NLPCTVEAVD VRALALERNL NLHAAGRLAR YRLLARVALT
IGAQAVATAH HADDQAETVL LHLVRGAGVA GLRGMRPVVA WEEWRTFAGD PSLQADHLRP
RLIRPLLDVP RARIEAYCTE RGLTPRRDPS NADRRYLRTR IRQDVLPVLT ALNPQIATAL
GRTAADCAEV ADFLEQELDR AWLTLVVARA NRIVFDGRRW RDLPPALQHA ALRRAYALLG
GSDTLGRDDV VRACDAVGRG VGKRIELPGG VALVTDYDGG FALMRGDAPP GDGVRLPVAE
MTLTVPGCVE LSDGRALCAD YCPAAMPTSR WDVFLNATVC PSPLTVRWRR PGDRMRLEGG
RGSRRLQDIM VDARVPRLWR STWPIVVSGE QIVWVPGVGV AEGMHAMIGQ PALHLWIEGM
TGVDVAMGIE REHSMHDDMA KILITAGQIQ ERVRALGAQI TADYRPLGDL LLVGVLKGCA
MFMVDLARAI DMPLAMDFIA TSSYGKTTES SGVVRMLKDL DTDIAGRHVV IVEDIIDSGL
TLAYLRGHLL RRNPASLRIC ALLNKPSRRR ADIPIDYLGF DIPNEFVVGY GLDFDEKYRN
LPYIGVLHER IYHSTA
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