Gene Rcas_0843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0843 
Symbol 
ID5538309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1104908 
End bp1105390 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content60% 
IMG OID640892995 
Product2Fe-2S iron-sulfur cluster binding domain-containing protein 
Protein accessionYP_001430978 
Protein GI156740849 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00152719 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCAACAA TCACGGTTAC GGTCAATGGC AAGTCGTACA CCAACGACGT CGAGCCGCGC 
ACGTTGCTGG TGCATTACCT GCGCGAGCAC CTGAACCTGA CCGGCACGCA CATCGGCTGT
GATACCAGCC AGTGTGGCGC GTGCGTGGTG CTGGTTGACG GTGTCAGCGT CAAGTCGTGT
ACGATGCTGG CAGTGCAGGC TGATGGCGCG AATGTGCTGA CAATCGAAGG GTTGGCGCAA
AACGGGCAGT TGCATCCGTT GCAAGAGGGG TTCTGGGAGT GCCACGGCTT GCAGTGCGGC
TACTGCACAC CCGGCATGAT CATGGCTGCC TACGACCTGT TGCAGCAGAA CCCCAACCCG
ACTGACGAGG AGGTGCGCCA CGGGCTGGAG GGGAACCTCT GCCGCTGCAC CGGGTATCAC
AACATTGTGC GCGCTGTGCA GTACGCTGCG GCAAAGATGC GCAGCGAAGA AGTGACTGTA
TAA
 
Protein sequence
MATITVTVNG KSYTNDVEPR TLLVHYLREH LNLTGTHIGC DTSQCGACVV LVDGVSVKSC 
TMLAVQADGA NVLTIEGLAQ NGQLHPLQEG FWECHGLQCG YCTPGMIMAA YDLLQQNPNP
TDEEVRHGLE GNLCRCTGYH NIVRAVQYAA AKMRSEEVTV