Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0842 |
Symbol | |
ID | 5538308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1102445 |
End bp | 1104826 |
Gene Length | 2382 bp |
Protein Length | 793 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640892994 |
Product | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding |
Protein accession | YP_001430977 |
Protein GI | 156740848 |
COG category | [C] Energy production and conversion |
COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
TIGRFAM ID | [TIGR02416] carbon-monoxide dehydrogenase, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00000826759 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGGCTG AAACGATGCC AACGAGGCTG GTGGGTCAGG CGATTAAGCG TCGTGAAGAC CCACAATTGA TCACAGGACA GGGCAGCTTC CTCGACGACA TTAAACTTCC GGGCATGACA CACGCCTGTG TGTTGCGCAG CCCCTATGCC CACGCAAAGA TCAAATCCAT CGATACGAGC AAGGCGAAAG CCCATCCGGG GGTGGTTGCC GTCTTCACCG GCGAAGATAT GCTCGACCTC AATCCGCTGC CGTGCGCCTG GCAGGCAGGG CGCGTGAAGA ACAATGTCAA CACGCCGCGC GTCCTGGCGG TCGGTGAGGT GCATTTCGCC GGTGATCCGG TTGCGCTGGT GATCGCCGAG GATCGCTACA TCGCGCGCGA TGCCTGCGAC TTGATCGAAG TCGAGTATGA GCCGCTGCCG GTGGTGGTGG ATGCCAAAAA AGCCACCGAG CCGGGTGCGC CGCAACTTCA CGAGAATGCG CCGAACAATA TTGTGATGGA ATGGGATGCG GGCGATAAGG CGAAAGCCGA TGCCGCCATC GCCGCCGCCG AAGTAGTGGT GCGCGAGCAG ATTATCAATC AGCGCCTCAT TCCGACGCCG ATGGAAACCC GTGGCGCGAT TGCGCGCTAT GAGCAGGCAA CCGGTGAGTT CACCCTTTGG ACAACTTCGC AGGCGCCGCA CGTCATGCGG CTGTTGCTGA CGGCGTTTGT CTTCGGTATT CCCGAAACGA AACTGCGTGT CATTTCGCCA AACGTCGGCG GCGGGTTTGG GCAGAAGATT TTCTGCTACA ACGACATGGC CTTCACGATG TGGGCGGCGC GCAAAATCGG GCGTCCGGTG AAGTTCGTCG AAGACCGGAG TGAAAATTAC AAGTACTCGA CCCATGGGCG CGATCATATC ACCGACGTTG AAATTGCCGG CACCCGCGAC GGCGCCATCA CCGGGCTGCG CGTCACCACC TATGCCAACC TTGGCGCTTA CCTCAGCACA ATTGCGCCTG GCATTCCGAC GACGCTCTAC GGCCGGATTA TCACCGGCGT CTACCGCATT CCCGCAGCCT ATGTCAAAGT ATACGGCGTT TACACCAACA CGGCGATGGT CGATGCCTAC CGCGGCGCCG GTCGTCCCGA AGCGTCGTAC CTGATCGAAC GCATGGTCGA TCGCTTCGCC GCTGAAATCG GGATGGACCC GGCAGAGGTG CGGCGCAAGA ACTTCATTCC ACCCGATGCG TTCCCCTACG ACAATGGCAT GGGTCTGCTG CCGTATGACA GCGGCAACTA CGAAGCAGCG CTCAACAAGG CGCTCGACAT CATCGGGTAC GCCAACTTCC GCAAGGAACA GGAAGAGGCG CGCAAACATG GCAGATACCT GGGACTCGGC ATCAGTTCGT ATGTCGAAAT CTGCGGCGTG GCGCCAAGTA AATGGATTGG TCTTCCCGGC GAAGGGTGGG GCGCCGGTCT ATGGGAGAGC GCCAATGTGC GCATTCACCT GACCGGCAAA GTTGTCGTGA CGACCGGGTC GCTCCCGCAC GGGCAGGGTG TCGAAACGAC TTTCGCGCAG ATCGTTGCCG ATGAACTTGG CGTGCCGTAT GACGATGTGG TGATCGAGCA CTCCGACACA GCCGGTACGC CGTTCGGCTA CGGCACCTAT GGATCGCGCT CGCTGGCGGT CGGCGGCACA GCAGTCTACC GCAGTGTGGC GAAGATCAAG GAAAAGGCAA AGAAACTCGC CGCGCACATG CTCGAAGCCA ATCCCGACGA CATGGTGTAC GAGAATGGGC GTGTCTACGT CAAAGGATCG CCCGACCGCG CCAAGACGCT GGCGGAGATT GCGCTTCAGG CATCGGTGGC ATACGACCTG CCGGAAGGTA TGGAGCCATT CCTCGACGAA ACCAGCTACT ACGATCCGCC GAACTGCACC TTCCCCTTCG GCACGCATAT TGCCATTGTC GAGGTGGACC CGGACACCGG CATCGTCGAT CTGAAGCGCT ACGTGGCGGT CGATGACTGC GGCAATGTCA TCAACCCGCT GATTGTCGAT GGTCAGATTC ACGGCGGCAT TGCCCAGGGG GTGGCGCAGG CGCTCTACGA GCGCGCTGTG TACGATGAGA ACGGGCAACT CGTCAGCGGC ACCCTGATGG ACTATGCCGT GCCCGCAGCG CATATGCTAC CGCCGTTCGA GACAGATCGC ACCGTCACTC CCAGCCCGGT CAACCCAATG GGGGTGAAGG GCGCGGGCGA AGCAGGGACG ATCGCCAGTG CGCAGGCGGT GATGAACGCC GTGATCGACG CACTCTCGCC ATTTGGCGTC AAACACATGC AGATGCCGGC GACGCCGGAG AATGTGTGGA AGGCGATCCG CGCCGCGCAG ACGGCTTCCT GA
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Protein sequence | MTAETMPTRL VGQAIKRRED PQLITGQGSF LDDIKLPGMT HACVLRSPYA HAKIKSIDTS KAKAHPGVVA VFTGEDMLDL NPLPCAWQAG RVKNNVNTPR VLAVGEVHFA GDPVALVIAE DRYIARDACD LIEVEYEPLP VVVDAKKATE PGAPQLHENA PNNIVMEWDA GDKAKADAAI AAAEVVVREQ IINQRLIPTP METRGAIARY EQATGEFTLW TTSQAPHVMR LLLTAFVFGI PETKLRVISP NVGGGFGQKI FCYNDMAFTM WAARKIGRPV KFVEDRSENY KYSTHGRDHI TDVEIAGTRD GAITGLRVTT YANLGAYLST IAPGIPTTLY GRIITGVYRI PAAYVKVYGV YTNTAMVDAY RGAGRPEASY LIERMVDRFA AEIGMDPAEV RRKNFIPPDA FPYDNGMGLL PYDSGNYEAA LNKALDIIGY ANFRKEQEEA RKHGRYLGLG ISSYVEICGV APSKWIGLPG EGWGAGLWES ANVRIHLTGK VVVTTGSLPH GQGVETTFAQ IVADELGVPY DDVVIEHSDT AGTPFGYGTY GSRSLAVGGT AVYRSVAKIK EKAKKLAAHM LEANPDDMVY ENGRVYVKGS PDRAKTLAEI ALQASVAYDL PEGMEPFLDE TSYYDPPNCT FPFGTHIAIV EVDPDTGIVD LKRYVAVDDC GNVINPLIVD GQIHGGIAQG VAQALYERAV YDENGQLVSG TLMDYAVPAA HMLPPFETDR TVTPSPVNPM GVKGAGEAGT IASAQAVMNA VIDALSPFGV KHMQMPATPE NVWKAIRAAQ TAS
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