Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0831 |
Symbol | |
ID | 5538297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1090658 |
End bp | 1091092 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640892983 |
Product | hypothetical protein |
Protein accession | YP_001430966 |
Protein GI | 156740837 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000499986 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000000401336 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGCCTGTGT TCAAGGACTA TGCCGAGCTT CATCAGTGTC TGAGTACATT GTATGATCAG GCGAAGTGCG ACGCTCGCAT TGCGCCGAAG ATCCGCGACT CGCATCTCGT GATCCAGTTC CGCTACGAAG ATCCGCGCGC AGTAGTGACG ATTAACGCCG CTGCGCCGCC AACACAACCA GGGGCGTATT TCGATGTTTT GTGGGGTGAC GATACCGGGT TGAAGCCGGA TGTCGAAATG AGTATGAAAG CCGACATTGC CCATCAGTTC TGGCACGGCA AAATCAACCT GATGACCGCG CTGGCGCGGC GTCAGATTAT TGCTAAGGGT CCCATCCCCA AAATACTCAA GTTGTTGCCC GCTGTTGAGC CTATGTACGA AATGTATCCG CGCCTGTTGC GCGAGATGGG ACGCGCCGAT CTTGTGTTGA CATAG
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Protein sequence | MPVFKDYAEL HQCLSTLYDQ AKCDARIAPK IRDSHLVIQF RYEDPRAVVT INAAAPPTQP GAYFDVLWGD DTGLKPDVEM SMKADIAHQF WHGKINLMTA LARRQIIAKG PIPKILKLLP AVEPMYEMYP RLLREMGRAD LVLT
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