Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0810 |
Symbol | |
ID | 5538276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 1064666 |
End bp | 1065415 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640892962 |
Product | hypothetical protein |
Protein accession | YP_001430945 |
Protein GI | 156740816 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0233285 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGTGC AACCGCACCG GCGCGCTGTA CTCTTTGTGA CGTGCATTGT CGATCAAGTC CATCCCAATA TCGGGTTGGC CGCCGCAGAA TTGCTCGAAC GGCAGGGGGT CGAGGTCGTT GTTCCACGCG GGCTGACGTG CTGTGGGCAG ATGGCGTTCA ATGCCGGGTT CCGTGATGAT GCCTATGCGG TCGCAGGGCG GACTATCGAA ATCCTGCGCA ACCAGGGAGA TGTCGTGCTT CCGTCCGGTT CGTGTGGTGC GATGATCCGC CATCTGTACC ACGAACTGTT CCACGGCACA CGCCACGAGG CCGCCGCGAA AGAACTGGCG CAACGCACGT ATGAACTGAG TGAATACCTG GTCGATGTGC TCGGTGTCAC CGATGTTGGT GCGCGCTACG ATGGGGTCAT AGCAGTTCAC GACGCCTGTC ATGGTCTGCG CTACATGGGT TTGGGGCGGC AGGCGCGCAT CCTGCTCGAC CATGTCGCTG GCGCGCGCAT TGTGTCATTG CCGGGCAGCG ATGAGTGCTG CGGTTTTGGT GGTCTGTTTG CCGTTAAGCA GCATCAGATT TCTGAAGCGA TGTTACAGCG CAAACTGGCG CATATCGCCG AATGCGGCTG CGACCTGGTA GTGACCGGCG ATTCGAGTTG CATGACGCAG ATCGCCGGTG GTCTCAGTCG GTCGAAGTCG CGGGTGCGGG CATGCCATCT CGCCGAGGTG CTGGCGAACA GGGTTGGGTT GGGGGGGTAG
|
Protein sequence | MTVQPHRRAV LFVTCIVDQV HPNIGLAAAE LLERQGVEVV VPRGLTCCGQ MAFNAGFRDD AYAVAGRTIE ILRNQGDVVL PSGSCGAMIR HLYHELFHGT RHEAAAKELA QRTYELSEYL VDVLGVTDVG ARYDGVIAVH DACHGLRYMG LGRQARILLD HVAGARIVSL PGSDECCGFG GLFAVKQHQI SEAMLQRKLA HIAECGCDLV VTGDSSCMTQ IAGGLSRSKS RVRACHLAEV LANRVGLGG
|
| |