Gene Rcas_0808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0808 
Symbol 
ID5538274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1061057 
End bp1061605 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content59% 
IMG OID640892960 
Productmethyltransferase type 11 
Protein accessionYP_001430943 
Protein GI156740814 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0203629 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCGTC CTGAAACCCT GGCGCGACTG ACTGACATCA TTACCGGGCT GGGTCTTTCC 
TCTGGCGCGC GGGTGCTCGA TGTCGGCTGT GGCACGGGAG TGCTGTTTGC ACTCCTTCGA
TCATGCATTG GCGATAAGGG GTTGCTGATA GGGCTGGATG TCTCCAGGCG CATGCTGGAC
TACGCCGTCG CCAGAGGTGA TGCGGATTTG TGCATACAGG CGGACGCCGA AAACCCGCCG
CTGTGTGATC GGATGTTCGA CTGGATCATC TGTAATGCGG TCTTACCACA CTTCACCGAC
AAGGCGGCGA CCTTACGCGC GCTGTGTCGT TGCCTGGCGC CGCACGGTAC ACTGGTCATC
TGCCATGCGA ACAGCCGCGA GATGATCAAT GCAATTCACC GGCGAGCAGG TGGCGCAGTG
GCTGATGATC GCCTGCCCGA TCCTGCAACC CTGACGACGC TTCTGCTTCA GTCCGGGTTG
TCTCCGGTGC ATACTCTGGA TGGCATTGAT CGCTACGTGA TGATTGCCCG TCCGATGATT
GCGAGATAG
 
Protein sequence
MERPETLARL TDIITGLGLS SGARVLDVGC GTGVLFALLR SCIGDKGLLI GLDVSRRMLD 
YAVARGDADL CIQADAENPP LCDRMFDWII CNAVLPHFTD KAATLRALCR CLAPHGTLVI
CHANSREMIN AIHRRAGGAV ADDRLPDPAT LTTLLLQSGL SPVHTLDGID RYVMIARPMI
AR