Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0804 |
Symbol | |
ID | 5538270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 1050338 |
End bp | 1051282 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640892956 |
Product | response regulator receiver modulated diguanylate cyclase |
Protein accession | YP_001430939 |
Protein GI | 156740810 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.504991 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCAAAG AGAAGATCCT GGTCGTCGAA GACGCCCCCG ACATTTCCAG TCTGCTCAAG ATTTATTTTA CGTCGCAGGG GTATGACGTC CTGACCGCAA TGCGCGGTCA GACTGCCCTC GAAATTTGCC GGAAGACGCC GCCCAACCTG GCGCTGCTCG ATGTCAATCT TCCCGATATG GAAGGGTACG AGATTGGGAA GGCGCTACGC CAGAGTGCGC GAACGCGCCA TATTCCGATC ATCTTCCTGA CGGCGCGCGG CGAAAAGCAG GATCGCCTGA AGGGACTCGG CGAGGTCCAG GCGGAGTATT ACATCGTGAA GCCCTTTGAT ATCGAAGAAG TGCATACGAT TGTCAAAGGC GCCCTTGATC GCGCGCGGCA GAAGAATCTG ACCCATCCGG TCACGAACCT GCCAACCGCC GAGTTGATCA ATGAACAATA TCGCACCTTG CTGTCCAGCA GCGGATGGGC GCTGGCGTTG GTGCATATCA ACGGCTTCGA CGCCTTCACG CAGTCCTATG GCGCTATGGT TGGCGAAGAG GTGCTGAAGT TTACGGCGCT GTTAATCAGC GAGGCGATCA ACGACTTGGG GCGCCCTGAA GATTTTGCCG GGCAAATGAT TGTCGGTCCG TCGTTTGTCA TTACCTCGAC GCCTGATGCC ATCCAGGCGA TCGCTCAGCG CCTGTGCGAC CGGTTCGATG CAGACATTGG GCTGCACTAC GACTACAAGG ATCGCCGCAA TGGGTATATC ACGATCCAGG GAGAGGATGG CAGTGTGCGG CAGTTGCCGT TGATGTCGCT CTCGATAGGC ATTCTGACCA GCAACGACGG GCCGTTTTAC GATATTCGCG AACTGAGCGA AAGTGTTGAA GAAGTTCGGC AGCGCGCCGT CGCCGAGGCG CGTGAGCAGG GGCGCAAAAG CCATATGAGC GTCGGACGAG CATAG
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Protein sequence | MSKEKILVVE DAPDISSLLK IYFTSQGYDV LTAMRGQTAL EICRKTPPNL ALLDVNLPDM EGYEIGKALR QSARTRHIPI IFLTARGEKQ DRLKGLGEVQ AEYYIVKPFD IEEVHTIVKG ALDRARQKNL THPVTNLPTA ELINEQYRTL LSSSGWALAL VHINGFDAFT QSYGAMVGEE VLKFTALLIS EAINDLGRPE DFAGQMIVGP SFVITSTPDA IQAIAQRLCD RFDADIGLHY DYKDRRNGYI TIQGEDGSVR QLPLMSLSIG ILTSNDGPFY DIRELSESVE EVRQRAVAEA REQGRKSHMS VGRA
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