Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0791 |
Symbol | |
ID | 5538257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1034531 |
End bp | 1035559 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640892943 |
Product | glycosyl transferase family protein |
Protein accession | YP_001430926 |
Protein GI | 156740797 |
COG category | [R] General function prediction only |
COG ID | [COG1216] Predicted glycosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.965247 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAAGGGA CCGAACTGAC AAAAGACGAT GACGGACTGC GACCACTCCT GTCAACCGTC ATTGTCAACA GTGACGGTTG CGCCGACACA CTGCGCTGCA TGGAGTCGCT CTGTGCGCAT CCGCCGGACC TTGCGGCGCT GGCGCCGCGC GCTGGCGCGC TGCCGGAGCA CGAGATCATT CTGGTAGACA ATCGGTCACG CGATGGATGC GTGACGCTGG TGCGCGAGCG TTTTCCCGCA GTCCGCATTC TTGAGTCACC GGCGCGCCAG GGATTTTCAA AAAACTACAA TCTTGGGATT CGACACGCGA ACGGTGTATT TGTTCTGGCG CTCAATAACG ACACCCTCGT TCATCCTGGC GCCCTGACGA CGCTGTTGAA CGCCATCCTT GACACTCCTG CGTATGGGAT GGTTGGTCCG CGCCTGATTG GGCGCGATGG CTGGGTGCAG GCGGTATGCG CACGCCCGGT GCTGACGCCT CTGGAATACC TCCTGACGCA ATCAATTGCC GATCCTGGCT TCCCTATCGG ACGGTTATGG CTGCTCTCCC AGCAGATAAG CGTGGCGCGT CGGCGGAGCG GTTCTGTCCC TTGCATCAGC GGCGCGTGCA TGCTGGTGCG ACGCACGGCG TTTGAACAGG CAGGATTGTT CGATGAAGCG GTCGATTTCT ACTACGAAGA TATCGAATGG TGTCACCGTA TGGCATGCCA TGGCTGGCAG GTAGGGTATG TCGCGGAAGC GACCATTACC CATCTCGGCG ATCAATCGAT CAGAAATGTC AAAGTCTGGG CAAAGAAGAG CGAATACTTC AGCGCGCTGC GCTACTTTCG CAGGTACCAC GGACTCACCG ATGAAGGGGC GCGTGTGCTG CGCGCAGCGA CCTCGTTTGG CTGGTTGATG CGCGGCATTG CTTTCGTGCT GGCTGAAGGG TTGTTCGGGC TGAAAGGGCA CGCGCGCGCC TATCTCTATC TCTGGCACTG GATTCTGCGC GATCCGTCCG CCAGACCTGA CCGGGTAGAG AGTCAATGA
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Protein sequence | MQGTELTKDD DGLRPLLSTV IVNSDGCADT LRCMESLCAH PPDLAALAPR AGALPEHEII LVDNRSRDGC VTLVRERFPA VRILESPARQ GFSKNYNLGI RHANGVFVLA LNNDTLVHPG ALTTLLNAIL DTPAYGMVGP RLIGRDGWVQ AVCARPVLTP LEYLLTQSIA DPGFPIGRLW LLSQQISVAR RRSGSVPCIS GACMLVRRTA FEQAGLFDEA VDFYYEDIEW CHRMACHGWQ VGYVAEATIT HLGDQSIRNV KVWAKKSEYF SALRYFRRYH GLTDEGARVL RAATSFGWLM RGIAFVLAEG LFGLKGHARA YLYLWHWILR DPSARPDRVE SQ
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