| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0744 |
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| Symbol | |
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| ID | 5538210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 973900 |
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| End bp | 975126 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640892900 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001430883 |
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| Protein GI | 156740754 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.871557 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGACG CACAGATTTC GGTGACGCTT TCTCCGGTGC AACGGCGCCA CGGCGCGATG
GTGATGCTCG TCATCACATT TCTGATGTGG GGTGGATTCT TCATGGTCAT TCCCCTTCTG
TCCCTACGGT ATGTTGATGA TCTGGGATGG TCGGCGGGCG CCGTGGGGTT GGTGCTGGCG
ATCCGGCAGT TGACGCAACA GGGGTTGACC GTCTTTGGTG GTGCGCTGGC AGATCGGTTC
GGTGCGAAGG AGTTAATCGT CGTCGGGATG CTCATTCGTG CAATAAGTTT CAGCGCGATG
GCGGTTGCGA CGACGTATCC CTTCCTGATG ATCAGCGCCA TTCTGGCGGC GCTTGGCGGC
GCCTTGTTCG ATTCGCCTTC GTCGGCGGCG ATGGTGGCGC TGACGCGCCC CGAAGAGCGC
AATCGCTACT TTGCCGTGTT GGGCATTGTG CGCGGGCTGG GAATGTCGCT CGGTCCGCTG
GTGGGCGCAG CGCTTTTGCG GGTTGATTTT GCCTTTGTTG CGCTTGCGGC TGGCGGGTGT
TTCTTTGTTG CTTCTGGAAT CACCTTCCTG TTGTTGCCGC CGGTGCGGGT TGCCGCCGAG
CGCAGCGAGT TGCTGGCGGG CATTCTGATG GCGCTGCGCG ACCGACGATT CATGGCGTTC
AACGTTCTGT TGATGGGATA CTGGTTTATG TGGGTGCAGT TGACCATCTC GCTCCCTCTG
GCAGCGCGGG CGCTGGCGGG AACTTCCGAT GCGGTCAGCT GGCTCTATGC GCTGAATGCG
GGTATGAGCG TGCTTTTGCA GTATCCGGTT GTGCGCCTGG CGGAACGCTG GTTGCGCCCG
CTTCCCGTGC TGATGTTTGG CATCGTGTTG ATGGCGCTAG GGTTAGGAAG TGTTGTGTTT
GCCGGCGCCA TTGGCGCGCT GCTGGTGAGT GTGGCGCTCT TCTCGTTCGG CGCGCTGCTG
GCGGCGCCTG GACAACAGAC GGTTGCCGCC GATCTGGCGA ACCCGGCAGC GCTCGGATCG
TACTTCGGCG TCAGTGCGCT GGCGCTGGCG CTTGGTGGCG GCATCGGCAA TTATGCGGGA
GGGGCGCTCT ATAGTTTGGG CCACGACATC AACTTCCCTG CGCTACCCTG GCTGGTTTGC
CTGGGAGTGG GCATCGGTTC GGCAGCCGGG CTTGCGGCGC TCGACCGGCG CCTTGTACGG
CGGGCAGAGT CAGGGGTTAG GGGTTAG
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| Protein sequence | MTDAQISVTL SPVQRRHGAM VMLVITFLMW GGFFMVIPLL SLRYVDDLGW SAGAVGLVLA
IRQLTQQGLT VFGGALADRF GAKELIVVGM LIRAISFSAM AVATTYPFLM ISAILAALGG
ALFDSPSSAA MVALTRPEER NRYFAVLGIV RGLGMSLGPL VGAALLRVDF AFVALAAGGC
FFVASGITFL LLPPVRVAAE RSELLAGILM ALRDRRFMAF NVLLMGYWFM WVQLTISLPL
AARALAGTSD AVSWLYALNA GMSVLLQYPV VRLAERWLRP LPVLMFGIVL MALGLGSVVF
AGAIGALLVS VALFSFGALL AAPGQQTVAA DLANPAALGS YFGVSALALA LGGGIGNYAG
GALYSLGHDI NFPALPWLVC LGVGIGSAAG LAALDRRLVR RAESGVRG
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