| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0733 |
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| Symbol | |
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| ID | 5538198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 957451 |
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| End bp | 958908 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640892888 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_001430872 |
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| Protein GI | 156740743 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.480414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCTTT TATCACATTC TCCCCGTGAT GACCTGGCGA TAACGCTGGG ACGCAGCCCG
CTGATAGCGG CGCTGGCGGC GGTGCTGCTC GGTGTGATTG GCGGCGCTGG AGTGGCGTTC
GGTCCGTTCT GGCTGGGTTT TGCGGCGCTG GCGGCGCTCA TGGGCGTCTA TGCGCTGCTG
ATCGACACCC GCGTCGGACT GGCGGTGGTG ATCGGCATTG CCACCATCAT TCCGTTTGCC
ACATTGCCCT TTCGCGCTGT AGTGACCCCG ACGCTCCTGA CACTGGCGCT GGCGGCGCTT
ATGGGGGTCT GGTCGCTACG GTTGCTGGTG CGCCGCGACG AGCGCCTGAT CGTCACGCCG
ATTGGTTTGG CGATCATCGG TTTTTTGGGG ATTACGCTGT TTGCCTTTCT ACTCGGTTCC
AATGCCAGTC CTGAACCCTC GCTGATCCAC AACTATGTCA AATTTGTGAT GGCGACGCTC
TTCTTCTTCA GCGTTGTTAA TTGTGTGCGC GACCGTGAGA CGGTGCGCTG GGTCATCCGT
TTTCTGATCA TCGGTGCTGC GCTGTCCGCA TTGATAGCCC TGGTTCTGTA CGTTATTCCC
GATCAACTGG CGCTTCAGAT TCTGGTATCG TTTGGGCGTA TCGGCTATCC GACCGAAGGG
CGTGTGCTGC GGTATGTTGA GGATGATCCC AACGGCTTGA TGCGCGCCAT CGGTCTCTCG
GTTGATCCCA ACAGTTTTGG CGGGATGCTG GCATTGATCG GCGCCCTGGC AGCGACTCAG
GCGGTGAGCG AACGTCCGGC GCTGCCGCGA CGGTTGTTGC TGATCGCTAC CGGCGCAATC
CTGCTGGCGT TGTTCCTGAC CTACTCGCGC GCAGCGCTTG GCGGCATGAT CGTTGCGGCG
ATGTATGTGG CGACACTGCG CTATCGGCGG CTCTGGTGGG TCATCCTGGC GGTTGGAGCG
CTGGCTGCCG CGCTCTTCAT CGGGCTTGGC GTCGGGGAAC GTTTCGTTGA GCGCGTGGTT
GAGGGGGTGC AGTTCCGCGA CCGGGCGAAC CAGATGCGCC TGGCGGAGTA CCAAAACGCA
ATTGCGATCA TTCAGGCATA TCCGGTATTC GGCATTGGTT TTGGTCAGGC GCCGGAGATC
GATCTGGTGG CGGGAGTGTC GAGCATCTAC CTGGCGATTG CACAACGCAC CGGTCTGGTC
GGTCTGACAG CGTTCCTGAG CATCATAGCC TGGTTTTTCG CGCGCAACTG GAGTGTGCTG
CGCGCTGCGG CACGCTCAGG CGATGAAGAG CGCGCTGCGT GGCTGGTGGC GCTCCAGGCG
GCGCTGGCGG CGGCATTGGC GGTGGGTTTG CTCGATCACT ATTTCTTCAA TATCGAGTTC
AGCCACATGA GCGCGCTGTT GTGGGGCACA GTCGGTCTGG CAGTGGCGAT TGAAGGATTG
GAAGAGGAGA CAGATTGA
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| Protein sequence | MSLLSHSPRD DLAITLGRSP LIAALAAVLL GVIGGAGVAF GPFWLGFAAL AALMGVYALL
IDTRVGLAVV IGIATIIPFA TLPFRAVVTP TLLTLALAAL MGVWSLRLLV RRDERLIVTP
IGLAIIGFLG ITLFAFLLGS NASPEPSLIH NYVKFVMATL FFFSVVNCVR DRETVRWVIR
FLIIGAALSA LIALVLYVIP DQLALQILVS FGRIGYPTEG RVLRYVEDDP NGLMRAIGLS
VDPNSFGGML ALIGALAATQ AVSERPALPR RLLLIATGAI LLALFLTYSR AALGGMIVAA
MYVATLRYRR LWWVILAVGA LAAALFIGLG VGERFVERVV EGVQFRDRAN QMRLAEYQNA
IAIIQAYPVF GIGFGQAPEI DLVAGVSSIY LAIAQRTGLV GLTAFLSIIA WFFARNWSVL
RAAARSGDEE RAAWLVALQA ALAAALAVGL LDHYFFNIEF SHMSALLWGT VGLAVAIEGL
EEETD
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