Gene Rcas_0703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0703 
Symbol 
ID5538168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp925010 
End bp925555 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content56% 
IMG OID640892859 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001430843 
Protein GI156740714 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000486087 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTTGAGC GCGTGGAAGC GCCGATTGCT GCAACGTTGC GCAACGGCCA GGCAGTGACG 
ATTCGCCCGC TCGCTGAGCA TGATCGCGAG GCGTTACTCC AGTTTGGTCG TTCGCTGCCG
GATGATGACT GGCTCTACCT TGAGACCGAT CTTCACAATC CTGACATCAT TGATCGACTG
GTCAATGCAT ACGCGGCAGA GAATTGGCGT CAGTTCGTCG CAGTAACGGA GATTGGCGAG
ATTGTCGGCT ACAGTGCGGT GCGGCGTTTG CCCGGATGGT CGAGCCACGT CGGTGATATT
CATCTGATTG TGCGCAAAGA TTATCGTCGC TGTGGGCTTG GCACTGCAAT GGCGCAGGCG
ATTTTCGATG CAGCCCGCGA TTTGGGGGTG GCAAAGGTGA TCGTTGAGAT TTTGCAGGAA
CAGACGAGCG GCATTGCGAT CTTCGAGCGC CTGGGGTTTA AGATTGAAGG CACGTTCAGC
GATCACGCGC GTGACCACGC TGGCAGGCGC CATCATCTGT ACATTCTTGC CTATCATATC
ATCTGA
 
Protein sequence
MVERVEAPIA ATLRNGQAVT IRPLAEHDRE ALLQFGRSLP DDDWLYLETD LHNPDIIDRL 
VNAYAAENWR QFVAVTEIGE IVGYSAVRRL PGWSSHVGDI HLIVRKDYRR CGLGTAMAQA
IFDAARDLGV AKVIVEILQE QTSGIAIFER LGFKIEGTFS DHARDHAGRR HHLYILAYHI
I