Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0655 |
Symbol | |
ID | 5538118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 862054 |
End bp | 863442 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640892812 |
Product | VWA containing CoxE family protein |
Protein accession | YP_001430798 |
Protein GI | 156740669 |
COG category | [R] General function prediction only |
COG ID | [COG3552] Protein containing von Willebrand factor type A (vWA) domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCAGC GGGTTGTCGA TTTTATCCAT GCCCTGCGCG CAAAAGGAGT GCGCATTTCG CTCGCCGAAA GTATCGACGC AATGCGTTGC GTCGAAATTG CTGGTGTCGC CGATAAACAA TTCTTCCGTT CGGCGCTGCG CGCGTCGCTG GTGAAAGAGC CACGCGACCT GCCGACGTTC GATGAACTCT TCCCGCGCTT CTTCGGTCTC GATGCCCCGC CGCCGCTCCA GCAGCCCGGC GGTGGGATGT CCCCCGAAGA GCGCGAACAA CTGGCGCAGA TGCTGCAACA GATGCTGGCA TCGCTCACAC CAGAGCAACT CCGGCGTCTG TTCGAGATGA TGATGACCGG GAAGGGCATG AGCGGCAGCC AGATGCGCCA GTTCATCGAC GAGAACACGA CCGCTACACA GATGACGACC GGCTTCCAAC CGTGGGCAAC GCGTCGCGCG CTGCGTGAAT TACAGTTCGA CCGCCTGGAG CAGTTGCTTC AGGAACTGAT CGAGAAACTG CGCGAAGCGG GAGTCGGCGA GGCGGCGCTT CGGCAACTGG AACAGGAAGC GCGCGAGAAC CGCGCGGCGC TGGCGCAGCA GATCGGCAAC GAAGTGGGGA ATGGGCTGCA ACAGCGCGAA GCCGAAGAAC GCCGTCGCCG CCCTGCCGAA GATTTGCAGG ATCGTCCATT CGAGGAACTG ACGTACCGGG ACGATGATGA GATGCGCGCC GTGATTAACC GCCTGGCCGC ACAGTTGCGC ACGCGCGTCG CGCTGCGGCA GAAACGCGCC AGCAAGGGCG CCCTCGATGC CAAGAGCACC ATCCGCGCCA ATCTGCGCTA CAGCGGCGTG CCACTCGACA TTCGCCACCG CCGCAAACAC CTGAAGCCGC GCATTACCGT CATCTGCGAT GTCTCCGGAT CGATGCGCGC TGTCACCGGC TTTATGCTGA TGCTCGTCTA TGCGTTGCAG GATCAGATCA GCCGCACCCG CCCCTTTGTG TATTACCGCA CCATTGCCGA TGTGCAGGCT GATTTTCAGC AACTGCGCCC CGAAGATGCG ATCCGCGTCG TGCCGGAGCG GGTGCAGGGT GGTCCCTGGC AGACGAGCCT GGGGGCATGT CTGGCGACAT TCACGCGCGA TTATCTCGAC GCGGTTGATC GCCGCACCAC GGTGATCTTC CTCGGCGATG GTGATGATCA TCTGTCGCCG CCGAACCCGC GCGCGTTCGA GACCATCAAG CGCCGTGCAC ACCGCGTCGT CTGGTTTAAC CCCGAACCGC CCTATCGCTG GGGGCGGGAA GACAACCACA TGCACATCTA CGCTCCCATG TGCGATGCGG TGCATCACGT GAGCAACCTG CGTCAGTTGG TTGCGGCTGT GGACGGGCTG TTTTCGTAA
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Protein sequence | MDQRVVDFIH ALRAKGVRIS LAESIDAMRC VEIAGVADKQ FFRSALRASL VKEPRDLPTF DELFPRFFGL DAPPPLQQPG GGMSPEEREQ LAQMLQQMLA SLTPEQLRRL FEMMMTGKGM SGSQMRQFID ENTTATQMTT GFQPWATRRA LRELQFDRLE QLLQELIEKL REAGVGEAAL RQLEQEAREN RAALAQQIGN EVGNGLQQRE AEERRRRPAE DLQDRPFEEL TYRDDDEMRA VINRLAAQLR TRVALRQKRA SKGALDAKST IRANLRYSGV PLDIRHRRKH LKPRITVICD VSGSMRAVTG FMLMLVYALQ DQISRTRPFV YYRTIADVQA DFQQLRPEDA IRVVPERVQG GPWQTSLGAC LATFTRDYLD AVDRRTTVIF LGDGDDHLSP PNPRAFETIK RRAHRVVWFN PEPPYRWGRE DNHMHIYAPM CDAVHHVSNL RQLVAAVDGL FS
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