Gene Rcas_0646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0646 
Symbol 
ID5538109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp848593 
End bp849327 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content62% 
IMG OID640892803 
Productcobalt ABC transporter, ATPase subunit 
Protein accessionYP_001430789 
Protein GI156740660 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID[TIGR01166] cobalt transport protein ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGC TGATCGAGTT CGATAACCTG CATTACACCT TTCCCGGCAG CAGGATGCCT 
GCATTGCGCG GCGCGACGCT GCGTATCGAA GCCGGGCAGC GTATCGTGCT GCTGGGGCGC
AATGGCGCCG GAAAGAGTAC GCTCCTTCTG CACGCCAACG GCATTCTGCG CCCGGCAGCA
GGGCAGGTGC GCCTGAATGG CAAACCGTTG GAATACACCC GTCGCGGTCT GCTGATGGTG
CGTCGTCAGG TGGGGGTAGT TTTCCAGAAT CCTGATGATC AACTGTTCAG CGCCAGCGTT
CGGCAAGACA TCAGTTTTGG TCCGCTCAAT CTGGGGTTGA GCATCGATGA GGTGCGCCAT
CGGGTGGCAG CGGCTGCGGA CCTGTGTGGC GTTGGCGATC TGCTCGACCG TCCGACCCAT
GCGCTGAGCG GCGGGCAAAA AACGCGCGTG GCGCTCGCAG GTGTGCTGGC AATGGGACCA
GATATTCTGC TGGTCGATGA GGCAACATCT GGACTGGACC CATGGATGCG TCGGCAGGTT
TTTGCCATTT TCAATCGACT GGTCGAGCGC GGCGCGACGG TCGTGCTCGC CACACACGAT
CTGGACGCTG CGCAGCACTG GGCAGACACG GTTGTGGTCA TGCACGAAGG GCGCGTTGCC
GTTGCCGCGC CTGCGGCGAA GGTGTTCACC GATCCAGACT TGCGGGCGCA GGTTGGACCG
GAGATTGAAC GTTGA
 
Protein sequence
MSALIEFDNL HYTFPGSRMP ALRGATLRIE AGQRIVLLGR NGAGKSTLLL HANGILRPAA 
GQVRLNGKPL EYTRRGLLMV RRQVGVVFQN PDDQLFSASV RQDISFGPLN LGLSIDEVRH
RVAAAADLCG VGDLLDRPTH ALSGGQKTRV ALAGVLAMGP DILLVDEATS GLDPWMRRQV
FAIFNRLVER GATVVLATHD LDAAQHWADT VVVMHEGRVA VAAPAAKVFT DPDLRAQVGP
EIER