Gene Rcas_0611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0611 
Symbol 
ID5538074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp809530 
End bp810966 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content63% 
IMG OID640892772 
Productaldehyde dehydrogenase 
Protein accessionYP_001430758 
Protein GI156740629 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.25734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.381542 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAATGA CACACAGCGA CACGCCGGAG TATCGCTTCT ACCTGGCGGG TGAATGGCGC 
ACCGGCGCGC CTTACACAGT CGCCTGCCCC TACGATGGCG CACCGGTCGC CGTCGTTCAT
CGCGCAACGT TAGACGACCT GGAACAAGCG ATTCAGGCTG CGGTCGCGGC GTTCCGAACA
ACGCGCAGCA CGCCGCTGCA CCGCCGTGCT GCCGCACTGC GCGCCATTGC CGCCAGCATC
GAGACGCGCG CCGAGGAACT GGCGCGCACA ATTGCGCTAG AAGCAGGAAA ACCCATCAAG
CAGGCGCGGA TCGAGGTCGC GCGAAGCATT GTGACGTTCT CGACCGCTGC GGACGAAGCG
ACGCGCTCGA ATGATGAAGC GCTGCGTCTC GATGCTGCTC CCGGCGGCGA AGGGCGACAC
GCAATCGTGC GCCGTTTTCC GGTGGGACCG GTCGCCGCCA TTACGCCGTT CAATTTCCCG
CTCAATCTGG TGGCACACAA GGTCGCCCCG GCAATCGCCG CCGGTTGTTC CGTCGTGCTC
AAACCTGCCT CGCAGACGCC GGTTACGGCG CTCAAACTGG CTGAGATGAT TGCATCGTCT
GGATGGATCC CTGAGGCGTT GAGCGTCCTA CCTCTCGCAA GCCGCGACGC TGCACCGCTG
ATCGAGGATG AACGCTTCGG GCTGCTGACC TTCACCGGTT CGCCTGCGGT CGGGTGGGAG
ATGAAACGGC GCGCCGGGCG CAAACGGGTG ACCCTGGAAC TCGGCGGCAA CGCAGGCGTG
ATTATCCACT CCGACGCCGA TCTTGCGTTC GCAGCAGAGC GGTGTGTGGT CGGCGGGTTT
TCCTACGCCG GGCAGAGTTG CATCAGCGTT CAGCGCATCT TTGTGCATGC TCCGGTGTAC
GACGCATTCA TGAACCTGTT TGTGCCGCAG GTGCGCGCAT TGAAGGTTGG GCATCCGCTT
GATGAGACGA GCGATCTGAG TTCGCTGATC AACCCGGCGG AGGCAGAGCG CGTGGCTGCC
TGGCTCGACG AGGCGCGCGG CGCCGGCGCA GAGTTCCTGA CCGGCGGCGT GGTGCAGAGC
GGCGTTGTCG CGCCGACAAT TGTGGCGCGC GCGGCGCCAG AACTGCGGGT GAATTGCCAG
GAAATCTTCG CGCCGGTCGT GACGGTGCAA CCTTACGAGA CGTTCGAGGC AGCACTGGAG
GCGGTCAACA ACAGCGATTT CGGATTGCAG GCAGGTGTGT TTACCCGCGA TGTCGGGCGT
ATTTTCCAGG CGTTCGATAC ATTAGAGGTC GGCGGCGTCA TTATCAATGA TGTTCCGACC
TGGCGCCTCG ATCCCATGCC GTATGGCGGC GTCAAGCAAT CCGGCTTCGG GCGCGAGGGG
CTGCGCTATG CGATTGAAGA GATGACCGAA CGCAAGTTGC TCGTGATGAG GGGTTAG
 
Protein sequence
MPMTHSDTPE YRFYLAGEWR TGAPYTVACP YDGAPVAVVH RATLDDLEQA IQAAVAAFRT 
TRSTPLHRRA AALRAIAASI ETRAEELART IALEAGKPIK QARIEVARSI VTFSTAADEA
TRSNDEALRL DAAPGGEGRH AIVRRFPVGP VAAITPFNFP LNLVAHKVAP AIAAGCSVVL
KPASQTPVTA LKLAEMIASS GWIPEALSVL PLASRDAAPL IEDERFGLLT FTGSPAVGWE
MKRRAGRKRV TLELGGNAGV IIHSDADLAF AAERCVVGGF SYAGQSCISV QRIFVHAPVY
DAFMNLFVPQ VRALKVGHPL DETSDLSSLI NPAEAERVAA WLDEARGAGA EFLTGGVVQS
GVVAPTIVAR AAPELRVNCQ EIFAPVVTVQ PYETFEAALE AVNNSDFGLQ AGVFTRDVGR
IFQAFDTLEV GGVIINDVPT WRLDPMPYGG VKQSGFGREG LRYAIEEMTE RKLLVMRG