Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0601 |
Symbol | |
ID | 5538064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 799871 |
End bp | 802399 |
Gene Length | 2529 bp |
Protein Length | 842 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640892762 |
Product | ATP-dependent DNA helicase RecG |
Protein accession | YP_001430748 |
Protein GI | 156740619 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1200] RecG-like helicase |
TIGRFAM ID | [TIGR00643] ATP-dependent DNA helicase RecG |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGGCA AAGACCAGAT CATTCGCCTG GGCAAACTGC TGGCGGAGGA ACAACGTCGC GGCTGTGATG ATCGCGCCGT GAATGGCGGT CTGGAGCGCT TTCTGACCGC CTGGAGGATG GACGCCGGCA TGGCGTTGCG CTACGAAGCC GTGCAACAGG CGCTCGAATT GCTCGCCGGA TACGCTGTGC TCGATCAAGC GACTCGCCGC GCGCGCGTCG GCATTGCGCT CGAAAGTCTG CGCTCGCTGT TCCGCGCCCA ACCGAACCCG CAGCCTGCAC CGGTTGCGTC GTCAGCGATG CCGACGCGCG CGCCAACCCG GCGCGCCTCC CGCCCTGATG CTCCGGCGCG TCCACTGACT CCGGACTCGC CGCTCGACGA CGTGCCGGGC ATCACACGCC AGATGGTGCA GTCGTTCCGG CGCCTCGGCG TTCGTACCGT GCGCGATCTG CTCTACCACT TCCCCCATCG CTACGATGAT TTCACCTCAC GCAAAACAAT CGCCGAATTG CAACCAGGCG CCGTCGAGAC GGTCATCGCC GAAGTGCTCG ATGCGCGCAC ACTGCCAATG AAAAGCGGAG GTTCACGGCT CGATGTGCTG GTCGGTGACG AAACCGGCAC GCTTAAGGTG GTCTTTTTTC GGCAACCCTG GCTGGCGCAG CGCTTTCTGG TCGGCACGAA GGTCGTGTTG AGCGGGAAGA TCGGAGTCTA CGATGGCTTG CGCCAGATGG CGTCGCCCGA ATGGCAACCC TTCACCGATG ACGACCTGAT CCACGTCGGG CGTCTGGTGC CGGTGCATCC CCTGACCCGC GGGCTGGTCG AGCGCAGTGC GCGCGCGCTG ATCAAACAGG TAGTGGATCG TTGCGCGCCG ATGCTGGAAG ATCATCTGCC CCCCGCAGTG CGCGAACGCA CGGGGTTGAT GCCGCTGCCG CAGGCGATTG CTCAGATCCA CTTCCCTGAC AGCCGCGATA TGCTTGAACA AGCGCGCCGG CGCCTTGGCT TCGACGAGTT TTTGTTCATT CAACTTGGCG TGCTGCAACG CAAGATGATC TGGCAGGCGC AGCGCGGTTA TGCTATCACC CGCCGCGACG ATGTGCACGA AGCATTTCTC AGACGGTTGC CGTTTGAACT GACCGGCGCT CAGGTGCGCG CCATCGAGGA AATCTTCGCC GATATGGCGC GCCCTGTGCC GATGGCGCGG CTTCTCCAGG GCGATGTCGG CAGCGGTAAA ACGGTCGTTG CGGCGGCAGC GGCGCTTCAG GCGATAGCAT CCGGCTATCA GGCGGCGCTC ATGGCGCCGA CCGAAATCCT GGCAGAACAG CATTATCGCG GCTTGCGCGC GCTCCTCGGC AACGTACCGG TTCCGCGTGA TCAACGCCAG GTTTCAGCAG AAGACGATCT CGACCCCGAA CAACGTGAGC GCCTGGAAGA GATCAAACGT ATTCTCGGCA TGAGCGGCGA TGATGACCTC GACGGGCGCG GCGTGCGGGT AGCGCTGCTC ACCGGCAGCC TCGGCGCGAA AGAGCGGCGT CGCGTGCTCG AAGGGATCGC GCGCGGCGAC ATCGATCTGA TCGTCGGCAC CCACGCGCTG ATTACCGAAA GTGTGCAGTA CGCTGCGCTT GGTCTCGCAA TCGTCGATGA ACAGCATCGC TTCGGCGTCG AACAACGGCA ACGCCTGAAA GATAAAGGAT ACAACCCGCA TATGCTGGTG ATGACGGCGA CCCCGATCCC GCGCACGCTG ACGCTGACGA TCTACGGAGA CCTGGATGTG TCGGTGCTCG ACGAGTTGCC GCCGGGGCGC CAGGAGATCA AGACGCGCTG GATTACGACG GTCGAGCGCG ACAAAGCCTA TCGCCATATC CGGCGCGAAG TCGCCAAGGG GCGGCAGGCA TTCGTCATCT GCCCACTGGT CGAAGAGAGC GAAAAGGTCG ATCTCCCTTC CGCCGAAGAA ATGCACGCTA CGCTGTCACG TGATGTCTTT CCCGATCTGC GGGTGGCGCT GATCCACGGC AAAATGCTGC CGCGCGAGAA GGACGCCGTT ATGATCGCCT TCCGCAATCA CGAATACGAT ATTCTGGTCG CCACTGCCGT CATCGAGGTC GGCATCGATG TTCCCAACGC AACGACGATC CTGATCGAAG GAGCGGAGCG GTTCGGTCTG GCGCAGTTGC ATCAGTTTCG TGGGCGAGTC GGGCGCGGGG TGCATCAGAG TTATTGCATC CTCGTCTGTG ACAAAGAGCA GAATGAAGTG ACGCGCCAGC GCATGGAGGC AATGGAGACG ATCAGCGATG GCTTCCGCCT GGCGGAGATT GATCTGCACC TGCGCGGACC CGGCGAGTTC TTCGGCACCC GGCAGAGTGG CACCCCCGAC CTCAAAGTGG CGCAGTTGAC CGATGTGCGC CTGCTCCAGA CGGCATACCG CGAGGCGCAG AAGATTCTGG CGGACGACCC ACAACTCGAA CGACCTGACC ACGCTCTGTT GCGCGCAAAG ATGGACGCCT TCTGGGTCGA GACCTTGCAG GCGGGCTAG
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Protein sequence | MDGKDQIIRL GKLLAEEQRR GCDDRAVNGG LERFLTAWRM DAGMALRYEA VQQALELLAG YAVLDQATRR ARVGIALESL RSLFRAQPNP QPAPVASSAM PTRAPTRRAS RPDAPARPLT PDSPLDDVPG ITRQMVQSFR RLGVRTVRDL LYHFPHRYDD FTSRKTIAEL QPGAVETVIA EVLDARTLPM KSGGSRLDVL VGDETGTLKV VFFRQPWLAQ RFLVGTKVVL SGKIGVYDGL RQMASPEWQP FTDDDLIHVG RLVPVHPLTR GLVERSARAL IKQVVDRCAP MLEDHLPPAV RERTGLMPLP QAIAQIHFPD SRDMLEQARR RLGFDEFLFI QLGVLQRKMI WQAQRGYAIT RRDDVHEAFL RRLPFELTGA QVRAIEEIFA DMARPVPMAR LLQGDVGSGK TVVAAAAALQ AIASGYQAAL MAPTEILAEQ HYRGLRALLG NVPVPRDQRQ VSAEDDLDPE QRERLEEIKR ILGMSGDDDL DGRGVRVALL TGSLGAKERR RVLEGIARGD IDLIVGTHAL ITESVQYAAL GLAIVDEQHR FGVEQRQRLK DKGYNPHMLV MTATPIPRTL TLTIYGDLDV SVLDELPPGR QEIKTRWITT VERDKAYRHI RREVAKGRQA FVICPLVEES EKVDLPSAEE MHATLSRDVF PDLRVALIHG KMLPREKDAV MIAFRNHEYD ILVATAVIEV GIDVPNATTI LIEGAERFGL AQLHQFRGRV GRGVHQSYCI LVCDKEQNEV TRQRMEAMET ISDGFRLAEI DLHLRGPGEF FGTRQSGTPD LKVAQLTDVR LLQTAYREAQ KILADDPQLE RPDHALLRAK MDAFWVETLQ AG
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