Gene Rcas_0595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0595 
Symbol 
ID5538058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp791541 
End bp793025 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content60% 
IMG OID640892756 
Producthypothetical protein 
Protein accessionYP_001430742 
Protein GI156740613 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.449201 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAGC GCACATCGTT GAAGAAGACC ATGGTATGCT GCATGCGCGG AGGGGGAGGG 
TTGACGGCTC TTCTAATGGG CATTATGGCT CTGGTTGTCG CCGCAGTACT GCGTCCGTCG
GCAGGATATG CCGAACAAAA CGGCATCAGC GCAGAACATA CCGTGTATCT TCCCCTGGTG
ACCAGGTCCG GCTGTACGGC GGAACTGCCG CGCATCAACG CACCAAAGTT CACCGGTGCC
ATTCCGTTCG AGCGAACCGC AATCGCCTGG TTTGGCAGGG TCTCTCCAAC GCAGAACTAT
ACCGACATCC GGGTTGGGTA CAACGCAACC GAACTGTTTG TGTACCTCGC CATCTTCGAC
CGCCACCTGT GGTACGACGA GAGTCCAACG CCGCAAACCC TGACTCAGTG GGATGCAGTG
ACGCTGCTGC TGGACACTTC CGGCGGCGCA GCCGTGTCGC CATCGTCGTG GAAGTTTGTC
GCGCAGTTGT ATGGCGAACG GAGTTCACAG CGACGGGTGG TCTACCGTGG AAGCGCCACC
GGATGGCAAC AGACCAGTGT GGCTTTTGAT GCGCTTCCTG GCTGGCGCGG GAACGCACTG
AATGACAACA GCGATAGTGA TCGCGGGTGG GCAATGGGTT TTACCATTCC CTTCAGCAGC
CTGGGGATCG CCTCCGCTCC GCCGGATGGA ACCTCCTGGC GCATGGCGGT GATCGTTCAC
GACCGGGACA CACGCGCCGG TCCGCCAATC GGCGATCAGG CGTGGCCGCC ACAGACGCCG
CTGGAGACGC CGGCCTGCTG GGGTGTTCTG AATTTCGGTG TGCCCGTCTA TCAGACTAGT
GCAACGCCGA CCGGTTCGCT GATCGTCCGC CGCCCCACGG AGCGCAGTCC GCTCGTGCCG
GATGCTGATG TCGGGGCTGC GATTGCCAAC CAATGTCCTG GTGACGAGAA TCATATCTGG
AACGAATGGG GGAACCGCAA CTATGGACGC GCACCTGACT TCAATATTCA GAATCAGTCC
GATGTGTCCG ACTGGCCCTG TTTTGCGAAG TACTATGTCA CTTTCCCGCT CGATGGCATC
CCGCCAGGCA AGGTGATCGT GTCTGCAATA CTGACCCTGC ACCAGTTTGG CAATTCCGGC
AGCGCGGGCC AGGCAAAACC GTCGTGGATT CAGGTGTCGG TGGCAGCCGG TGACTGGAAT
GAACAGACCA TCACCTGGAA CAACGCCCCA ATCGCCTATG AGAATGTTGC CATAAGTCGG
GTAGATCCCG TCACCAGCTC GATTAACTGG CCCGGCGTCC CGCGCACCTG GGATGTGTCG
TATGCCGTGG CACGGGCGTA TGCGCGCGGT GAGCCGTTGC GCCTGGTACT GTACAGCGCC
GACTCGGACT ATCATAGTGG CAAGTATTTT GTCTCCTCCG ACACGGGCGA CTGGAATATC
GAAGGTCGTC CGCGCCTTGA CGTGCGCTGG GGTGAGGCGA GGTGA
 
Protein sequence
MPKRTSLKKT MVCCMRGGGG LTALLMGIMA LVVAAVLRPS AGYAEQNGIS AEHTVYLPLV 
TRSGCTAELP RINAPKFTGA IPFERTAIAW FGRVSPTQNY TDIRVGYNAT ELFVYLAIFD
RHLWYDESPT PQTLTQWDAV TLLLDTSGGA AVSPSSWKFV AQLYGERSSQ RRVVYRGSAT
GWQQTSVAFD ALPGWRGNAL NDNSDSDRGW AMGFTIPFSS LGIASAPPDG TSWRMAVIVH
DRDTRAGPPI GDQAWPPQTP LETPACWGVL NFGVPVYQTS ATPTGSLIVR RPTERSPLVP
DADVGAAIAN QCPGDENHIW NEWGNRNYGR APDFNIQNQS DVSDWPCFAK YYVTFPLDGI
PPGKVIVSAI LTLHQFGNSG SAGQAKPSWI QVSVAAGDWN EQTITWNNAP IAYENVAISR
VDPVTSSINW PGVPRTWDVS YAVARAYARG EPLRLVLYSA DSDYHSGKYF VSSDTGDWNI
EGRPRLDVRW GEAR