Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0595 |
Symbol | |
ID | 5538058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 791541 |
End bp | 793025 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640892756 |
Product | hypothetical protein |
Protein accession | YP_001430742 |
Protein GI | 156740613 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.449201 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAAGC GCACATCGTT GAAGAAGACC ATGGTATGCT GCATGCGCGG AGGGGGAGGG TTGACGGCTC TTCTAATGGG CATTATGGCT CTGGTTGTCG CCGCAGTACT GCGTCCGTCG GCAGGATATG CCGAACAAAA CGGCATCAGC GCAGAACATA CCGTGTATCT TCCCCTGGTG ACCAGGTCCG GCTGTACGGC GGAACTGCCG CGCATCAACG CACCAAAGTT CACCGGTGCC ATTCCGTTCG AGCGAACCGC AATCGCCTGG TTTGGCAGGG TCTCTCCAAC GCAGAACTAT ACCGACATCC GGGTTGGGTA CAACGCAACC GAACTGTTTG TGTACCTCGC CATCTTCGAC CGCCACCTGT GGTACGACGA GAGTCCAACG CCGCAAACCC TGACTCAGTG GGATGCAGTG ACGCTGCTGC TGGACACTTC CGGCGGCGCA GCCGTGTCGC CATCGTCGTG GAAGTTTGTC GCGCAGTTGT ATGGCGAACG GAGTTCACAG CGACGGGTGG TCTACCGTGG AAGCGCCACC GGATGGCAAC AGACCAGTGT GGCTTTTGAT GCGCTTCCTG GCTGGCGCGG GAACGCACTG AATGACAACA GCGATAGTGA TCGCGGGTGG GCAATGGGTT TTACCATTCC CTTCAGCAGC CTGGGGATCG CCTCCGCTCC GCCGGATGGA ACCTCCTGGC GCATGGCGGT GATCGTTCAC GACCGGGACA CACGCGCCGG TCCGCCAATC GGCGATCAGG CGTGGCCGCC ACAGACGCCG CTGGAGACGC CGGCCTGCTG GGGTGTTCTG AATTTCGGTG TGCCCGTCTA TCAGACTAGT GCAACGCCGA CCGGTTCGCT GATCGTCCGC CGCCCCACGG AGCGCAGTCC GCTCGTGCCG GATGCTGATG TCGGGGCTGC GATTGCCAAC CAATGTCCTG GTGACGAGAA TCATATCTGG AACGAATGGG GGAACCGCAA CTATGGACGC GCACCTGACT TCAATATTCA GAATCAGTCC GATGTGTCCG ACTGGCCCTG TTTTGCGAAG TACTATGTCA CTTTCCCGCT CGATGGCATC CCGCCAGGCA AGGTGATCGT GTCTGCAATA CTGACCCTGC ACCAGTTTGG CAATTCCGGC AGCGCGGGCC AGGCAAAACC GTCGTGGATT CAGGTGTCGG TGGCAGCCGG TGACTGGAAT GAACAGACCA TCACCTGGAA CAACGCCCCA ATCGCCTATG AGAATGTTGC CATAAGTCGG GTAGATCCCG TCACCAGCTC GATTAACTGG CCCGGCGTCC CGCGCACCTG GGATGTGTCG TATGCCGTGG CACGGGCGTA TGCGCGCGGT GAGCCGTTGC GCCTGGTACT GTACAGCGCC GACTCGGACT ATCATAGTGG CAAGTATTTT GTCTCCTCCG ACACGGGCGA CTGGAATATC GAAGGTCGTC CGCGCCTTGA CGTGCGCTGG GGTGAGGCGA GGTGA
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Protein sequence | MPKRTSLKKT MVCCMRGGGG LTALLMGIMA LVVAAVLRPS AGYAEQNGIS AEHTVYLPLV TRSGCTAELP RINAPKFTGA IPFERTAIAW FGRVSPTQNY TDIRVGYNAT ELFVYLAIFD RHLWYDESPT PQTLTQWDAV TLLLDTSGGA AVSPSSWKFV AQLYGERSSQ RRVVYRGSAT GWQQTSVAFD ALPGWRGNAL NDNSDSDRGW AMGFTIPFSS LGIASAPPDG TSWRMAVIVH DRDTRAGPPI GDQAWPPQTP LETPACWGVL NFGVPVYQTS ATPTGSLIVR RPTERSPLVP DADVGAAIAN QCPGDENHIW NEWGNRNYGR APDFNIQNQS DVSDWPCFAK YYVTFPLDGI PPGKVIVSAI LTLHQFGNSG SAGQAKPSWI QVSVAAGDWN EQTITWNNAP IAYENVAISR VDPVTSSINW PGVPRTWDVS YAVARAYARG EPLRLVLYSA DSDYHSGKYF VSSDTGDWNI EGRPRLDVRW GEAR
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