| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0590 |
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| Symbol | |
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| ID | 5538053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 785537 |
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| End bp | 787186 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640892751 |
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| Product | anti-sigma-factor antagonist |
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| Protein accession | YP_001430737 |
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| Protein GI | 156740608 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.641897 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACTG CGTCTCTCTC CACACCCGCA GGGCGTAGCC TTTCTACAAC GCTCGCTCTG
GCGCTGATCA GTCTCAGCGT GGTCGCTTTG TTGGTCAGCA ATGCATTGCA AATGGCATCG
AACTGGCAGG TGCACCAGCG CGGCCTCGCC CGTGAGCAGG AGTCGCGCGC GCATGGCGCC
GCTGTTGAGG TACGCGCGTT TTTCGATGCG CGCTGGAATA TGCTGGCCAC ATCGATCAAA
ATGTCGAGCC TGGCAACCGC GCCAGCGGAG CAACGCACCG AGGCGCTCGA GCGACTTCTG
GTTCTCGACC CATTATTCGA GCAATTAATA ATCCTCGACG ATCAACGCTT CGTCGTCGCC
AGCGCGAGTC AGAACCCTCA CAAAACTGTC AATTTTCTCG ACCCGGCGCT CATCGACGAA
ATTATGCGTC GGACGGCACT GCGCGATCGG CTGATCAGTT CGTTGCGCAT CGATGCCGCA
AGCGGTGAAC CCGGCATTGT GATGGCACTC CCGCTCGTCG ATTCGTTCGA GAATTACCAC
GGCGCCCTTA TTGCGACGGT CAATGCTCGC CTGCTCTGGA CGACGGTCCA GCGGCAGACG
CCTGATCCTG ACAGCCTGGC ATACGTTGTC GACCGTCAGG GAAACCTGCT GGCGTGTTCC
GACACGGCGC GTGTGATGCG CGGCGACAAC GCTTCAGGGG TTGCTATCGT GCAGCGGTTT
ATTCGGGAGC GGTCGGCATC GATCCAGACC ATGCACTACA CTGGCCTTTC TGGCGCTGAG
GTCGTCGGCA GTTACGAGGC GCTCGACGAT CCTCCCTGGG CAGTGGTGAT CGAAACGCCG
CGCGCGGTCG CGTATCGCTC GGTTTTGAAT GATCTCGTCG TCTCCGGTAT AATTCTCTTG
GGCGCCGTTG TCGTCTCCGG CGGGATTGGT CTCTACCTGG CGCGCTGGCT GACGGCGCCG
TTGATCGATC TGACGCGCGT TGCCAATCGG ATCGCATCAG GAGAACGCGA TGTGCCGGTT
GATGCGCGCG GTCCGCGAGA GATTCAGATA CTGGCGCGGG CGTTCACCGC TATGACAGCG
CAACTGGAAG CAAATCTGGA AACGCTGGAG CAGCGCGTTG CGCAACGCAC TGCCGATCTC
CGGGCGGCGC TCGCCGAGGT GGAGGCGCGG GCGCGCGAAC AGGCGCGCCT GCTTGAAGAA
ATCGCCCATC AACGCGAGGT GATCCGCGAG TTGAGCGTAC CGGTGCTGCC GGTAACAGAG
GACGCCCTGG TGATGCCGTT GATCGGGGCC ATTGACACCG AGCGGCTGGC GGATATTCAG
GATCGGGCGC TGCACGCCTT GCAGCGTTCG CGCGCGTGCT ACCTGCTCGT CGATATTACC
GGGGTGCCGG TGGTTGACAG TCAGGTGGCG CAGGGGCTGA TCGCCATCGC CAGTATGTGT
CGGTTGCTCG GCGCTGAGAT GGTGCTGATC GGCATTCGTC CGGAGGTGGC GCAGACGATT
GTCGGGTTGG GATTGAATCT CTCTTCGCTG CGCACTGCGG CTGACCTGCA AACGGTTCTG
CGCGACTTCG CGGCGCAGCG CCGTGATCGC GTTGCACGCA ATGGTGAGGC AATCGAGCGC
AGGAACGGAC GAGGATCTTT GCCCGCGTGA
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| Protein sequence | MNTASLSTPA GRSLSTTLAL ALISLSVVAL LVSNALQMAS NWQVHQRGLA REQESRAHGA
AVEVRAFFDA RWNMLATSIK MSSLATAPAE QRTEALERLL VLDPLFEQLI ILDDQRFVVA
SASQNPHKTV NFLDPALIDE IMRRTALRDR LISSLRIDAA SGEPGIVMAL PLVDSFENYH
GALIATVNAR LLWTTVQRQT PDPDSLAYVV DRQGNLLACS DTARVMRGDN ASGVAIVQRF
IRERSASIQT MHYTGLSGAE VVGSYEALDD PPWAVVIETP RAVAYRSVLN DLVVSGIILL
GAVVVSGGIG LYLARWLTAP LIDLTRVANR IASGERDVPV DARGPREIQI LARAFTAMTA
QLEANLETLE QRVAQRTADL RAALAEVEAR AREQARLLEE IAHQREVIRE LSVPVLPVTE
DALVMPLIGA IDTERLADIQ DRALHALQRS RACYLLVDIT GVPVVDSQVA QGLIAIASMC
RLLGAEMVLI GIRPEVAQTI VGLGLNLSSL RTAADLQTVL RDFAAQRRDR VARNGEAIER
RNGRGSLPA
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