Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0583 |
Symbol | |
ID | 5538046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 777059 |
End bp | 778198 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640892744 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001430730 |
Protein GI | 156740601 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.394739 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTTCG CTCTCAGTGA GCAGCATGAG ATGTTACGCC AGACGGTGCG CGCATTCGCC GAGCAGGAGG CGCGCCCCAC CGCAGCGGCG CGTGATGAGG CGATGGAGTT TCCGGTTGAT CTGGTGAAGA AAATGGGGCA GCTTGGCTTG ATGGGTGTGG CAGTGAGCGA GCAGTATGGC GGCGCCGGGC TTGATTATGT ATCGTATGCG ATTGTGATCG AAGAATTGTC GCGGGTGGAT GCCTCACTCG GCGTCATTGC ATCGGTCAAC AACTCTCTTG TGTGTTATGG CATTGAAACC TTCGGGACGG AAGACCAGAA ACGCGAATTG CTGACACCGC TCGCCGAAGG ACGGATGCTT GGCGCCTTCT CGCTCTCTGA ACCCGGCGCC GGTTCGGATG CCGCTGCGCA GAAAACGACG GCAGCGCGCG ATGGCGACTA CTATGTGATT AATGGCATCA AAAACTGGGT GACGAATGGC GATTACGCCG ACACGATCAT TCTGATGGCC ATGACCGATC CTGGCAAAGG TCATCGGGGA ATCACAGCCT TCCTGGTCGA TCCGCGCGAG CCGGGGTGCA GCATCGTGAA GGTCGAACAC AAACTGGGCA TCCGCAGCGC ACACTCCTGC CAGATGGCGT ATGATAATTA TCGTCTGCCG GCGTGGCGAC GGCTTGGCGA GGAGGGGCAG GGGTTCAAAA TCGCTATGAC CATCTTGAAT GCCGGGCGGA TCGGAATTGC GGCGCAGGCG GTCGGCATTG CGCAGGGCGC TTACGAAGCG GCGCTCGAAT ACGCCAAAAT CCGTGAACAG TTTGGCAAGC CGATCATCGA AAATCAGGCA ATCGGATTTA CGCTGGCGGA TATGGCGACG CGCATCAAGG CGGCGCGCCT GCTGACGTAT GAAGCCGCCT GGCGCAAGGA TCAGCATCTC GACTTCGTCA GCGCCGCGTC GATGGCGAAA CTGTACGCTT CCGAAACCGC GATGTGGACG GCGACCAAGG CGGTGCAAGT GTTTGGCTCG AACGGCTACT CGAAGGAGTA TCCGGTCGAA CGCTACTTCC GCGACGCCAA AATCACCGAG ATTTACGAAG GCACGAGCGA AATCCAGCGC CTGGTCATTG CCCGCGAGAT TGCACGGTAG
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Protein sequence | MDFALSEQHE MLRQTVRAFA EQEARPTAAA RDEAMEFPVD LVKKMGQLGL MGVAVSEQYG GAGLDYVSYA IVIEELSRVD ASLGVIASVN NSLVCYGIET FGTEDQKREL LTPLAEGRML GAFSLSEPGA GSDAAAQKTT AARDGDYYVI NGIKNWVTNG DYADTIILMA MTDPGKGHRG ITAFLVDPRE PGCSIVKVEH KLGIRSAHSC QMAYDNYRLP AWRRLGEEGQ GFKIAMTILN AGRIGIAAQA VGIAQGAYEA ALEYAKIREQ FGKPIIENQA IGFTLADMAT RIKAARLLTY EAAWRKDQHL DFVSAASMAK LYASETAMWT ATKAVQVFGS NGYSKEYPVE RYFRDAKITE IYEGTSEIQR LVIAREIAR
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