| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0560 |
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| Symbol | |
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| ID | 5538023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 746583 |
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| End bp | 749513 |
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| Gene Length | 2931 bp |
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| Protein Length | 976 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640892722 |
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| Product | FAD linked oxidase domain-containing protein |
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| Protein accession | YP_001430708 |
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| Protein GI | 156740579 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0247] Fe-S oxidoreductase
[COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.389138 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTATG ACGATCTTGC CGCCGAACTG CGCGAGTGCG TCATGGGCGA CGTGCAGACC
GATGCGATTT CACGCGCTCT CTACGCAACC GACGCGAGCA TCTACCAGAT TGAGCCGCTT
GGTGTGGTGC TGCCAAAGGA CGAAGCGGAC GTCGCTGCGC TCGTGCGCCT GGCGCGCCTG
CGGCGCCTGC CGATTGTGCC GCGCGGCGGC GGCACCAGCC TGGCAGGGCA GGCGGTTGGA
CGCGCTATTC ACGTCGATTT CACCAAGTAC ATGAACCGCC TGCTAGAGGT GAATGTCGCC
GGACAGTGGG CATGGGTTGA ACCGGGGATC GTCCTCGATC ACCTGAATGC GGAACTTGCG
CCGCACAATA TGAAGTTTGC GCCGGATGTC TCTCCGTCGA ACCGTGCCAC AATCGGCGGC
ATGATCGCCA ACAATTCATC CGGCATGTAC TCGCTGGTGT ACGGCAAGAC CATCGATCAC
GTGCTGGAGT TGAAGGTCAT GCTGTCCGAT GGCAGTATCA CTACCTTTCG CCCGCTCGAT
GAAGCGGAAC TGCGCGCCTG CATGGCGAAC ACTGACCTCG AGGGGCGCAT CTACCGCACG
GTAGCGCGGC TGGCGCGCGA GCATGCCGAC GAAATTGCGC GGCGCTATCC CAAAGTGCTG
CGGCGCGTCG GCGGTTACAA CCTCGATGCG TTCGTTCCGG TGAACGACGA TGACGCCACC
CGCTACGGCA TCATGTTTGG CGCGCGATCA CCCGACCGAC GCTTCAACAT GACGAACATG
ATTGTCGGTT CGGAAGGCAC GCTGGCGCTG GTGCTGGCGG CACGCCTGCG TCTTGTTCCA
CGCCCGAAGC ATACCGCCAT TGCTATTCTG GAGTTTGACA CACTCGATGC CGCGCTCGAT
GCGGTCGTTC CCTGCCTGGA GTGCAGTCCG GCCGCCGTCG AACTGATGGA CGACATTCTG
CTCGACCTGA CGCGCAAATC GCACGAATAT GCACAATATC TGGCGCTCTT CGTCCAGGGA
AGGCCAGGCG CGCTGTTGCA GGTCGAGTTC TTCGGCGAGT CCGAGGATGA GGTGCATGCC
AGCCTGACGC GGTTGGAGCA GCATCTGCGC ACCCGGTGCA GCGCCATCAC CCCCATGAGT
GATGCGCGCC GGAAGAACGC CGTGCTGGCG GTGCGCAAAG CGGGTCTGCC GCTGCTCCAG
TCCCTCTCGC CGGACCTGAA GCCGGAGACG TTCGTTGAAG ACTCTGCCGT GCCGCCAGAG
AAGTTGAACG TCTACCTGCG CCGCTTTCGC AATATTTGCC ACGCGCATGG TGTGCAGGTC
GCTTTTTATG GACATGCCAG CGTCGGCGTT ATCCATGCCC GCCCGCTGCT CAACCTGAAG
CATGCCGATG ATGTGCGGAA AATGCGCGCC ATTGCGGAGG AAATCAAGGA CCTCGTGATA
GAGTTCGGCG GCGCGCTCTC CGGCGAACAT GGCGATGGCA TGCTACGCGC CGAGTTCAAC
CGCGAGTTGT TTGGCGAAAC GCTCTACGAA GCGTTTCGTG AGATCAAGCA TACCTTCGAT
CCTTACGACA TCTTCAACCC CGGCAAAATC GTCGATGCCC CGCCGATGGA TCGCCATTTG
CGCTATGGCG AGCGCTACCA TCCGATCCAG TTGCACACCC GCTTCCGTTT CAGCGATACC
GGCGGCATCG TCGGCGCCGT CGAGTTGTGC AATGGCAATG GTCTATGCCG CAAAATGTCC
GGCGGCACGA TGTGCCCCAG TTACATGGTG ACGCGCGATG AAGAACACTC GACACGCGGG
CGCGCGAATG CGCTACGCAT GGTCTTTTCT GGTGCGCTTC CGCTCGATGC GCTCACCGGT
GCGCGTATGA AAGAGGTGAT GGACCTCTGC CTGGAGTGCA AAGGATGCAC TGGCGAGTGT
CCGTCGCGGG TCAACATGAC GCGCCTGAAA TCGGAATGGC TGTCGATCTA CTACGAGCAG
CATGGCATTC CGCTGCGATC ACGCATCTTT GGCGCTATCC GAACGATCAA CGAACTCGGC
AGTCGCCTCG CGCCACTGGC GAACCGTCTG CTCGCATTGC CGTTCGTTCC GACGCTCCAG
GAACGTCTGA TCGGCGTCAG TCGTCAGCGC CGTTTACCGC CGTTTGCAGC GCAACCATTC
CACCGCTGGT TTGCCGCCCG TCAGTCGCCG GTTGACGCTG ACCGTCCTTC GGTCGTTCTC
TTTCCCGACA CCTTCGCCGA CTACAACGAT CCGCACATCG CGCAAGCGGC GGTGCGCGTC
CTGGAAGCCG CCGGGTATCG TGTGCTCCTG CCGACGCGCC GCGTCTGCTG CGGGCGTCCG
CAGATTTCGA AGGGATTGCT GAAGGAAGTC CAGGCGCTGG CGCAGCGGCA GCTCGATGCT
CTGGGACCCT ATGCCGCCGC CGGTATTCCG ATCATCGGTC TCGAACCGAG TTGTATCCTG
AGCTTCCGCG ACGAGTATCC CGACCTGCTG GACGACCCAC GCACCGCGAC GCTGGCCCAG
ATGTCGTTCC TGTTCGATGA GTTCCTGGCG CGCGAAGTGC GCGCCGGTCG CGCAACGTTG
CGTTTCCGCG ATCAGGCGCC GCGCCGATAT CTGTTCCATG GTCACTGCCA CCAGAAGGCG
CTCATCGGCA GCGCCTATGC GCTGGCGCTG CTCCGGATGA TCCCCGGCGC CGACGCGCGC
GAGGTTGATA GCGGGTGCTG CGGCATGGCG GGGTCCTTTG GATATGAAGC AGAACACTAC
GCCATCTCGC AGAAGATCGG TGAACGCGCG CTCTTCCCTG CGGTGCGTGC ATTGCCCGCC
ACCGCTGAGG TTGTCGCAAT GGGAACCAGT TGCCGCCAGC AGATCGCCGA TGGAACCGGA
CGGCGCGCGC GACACCTCGC CGAAGTGTTG GCGGATGCGC TCGAAGAGTA G
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| Protein sequence | MKYDDLAAEL RECVMGDVQT DAISRALYAT DASIYQIEPL GVVLPKDEAD VAALVRLARL
RRLPIVPRGG GTSLAGQAVG RAIHVDFTKY MNRLLEVNVA GQWAWVEPGI VLDHLNAELA
PHNMKFAPDV SPSNRATIGG MIANNSSGMY SLVYGKTIDH VLELKVMLSD GSITTFRPLD
EAELRACMAN TDLEGRIYRT VARLAREHAD EIARRYPKVL RRVGGYNLDA FVPVNDDDAT
RYGIMFGARS PDRRFNMTNM IVGSEGTLAL VLAARLRLVP RPKHTAIAIL EFDTLDAALD
AVVPCLECSP AAVELMDDIL LDLTRKSHEY AQYLALFVQG RPGALLQVEF FGESEDEVHA
SLTRLEQHLR TRCSAITPMS DARRKNAVLA VRKAGLPLLQ SLSPDLKPET FVEDSAVPPE
KLNVYLRRFR NICHAHGVQV AFYGHASVGV IHARPLLNLK HADDVRKMRA IAEEIKDLVI
EFGGALSGEH GDGMLRAEFN RELFGETLYE AFREIKHTFD PYDIFNPGKI VDAPPMDRHL
RYGERYHPIQ LHTRFRFSDT GGIVGAVELC NGNGLCRKMS GGTMCPSYMV TRDEEHSTRG
RANALRMVFS GALPLDALTG ARMKEVMDLC LECKGCTGEC PSRVNMTRLK SEWLSIYYEQ
HGIPLRSRIF GAIRTINELG SRLAPLANRL LALPFVPTLQ ERLIGVSRQR RLPPFAAQPF
HRWFAARQSP VDADRPSVVL FPDTFADYND PHIAQAAVRV LEAAGYRVLL PTRRVCCGRP
QISKGLLKEV QALAQRQLDA LGPYAAAGIP IIGLEPSCIL SFRDEYPDLL DDPRTATLAQ
MSFLFDEFLA REVRAGRATL RFRDQAPRRY LFHGHCHQKA LIGSAYALAL LRMIPGADAR
EVDSGCCGMA GSFGYEAEHY AISQKIGERA LFPAVRALPA TAEVVAMGTS CRQQIADGTG
RRARHLAEVL ADALEE
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