| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0530 |
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| Symbol | |
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| ID | 5537993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 693782 |
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| End bp | 695659 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640892692 |
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| Product | ABC transporter related |
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| Protein accession | YP_001430678 |
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| Protein GI | 156740549 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.164173 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGGACG TTCCCGGAAG ACGGCGCGCC CGCCGTCCGT TCGAGCCGGA AACTGCGGCA
ACCTGGTCTG AACGCATGGC GCAAATACGC GATGCATTCG GCAATATCCC CGGCGCCTTC
CGTCTCGTGT GGCGGGCAGA CCGGCGGTCG ACCATTATGA TGGCGATATT GACGCTGATC
GCGGCAGCGC TTCCCGCAGC GCAGGCGTGG GCAGGCGCAC TGATCGTCGA CTCGGTCGTC
AATTCGTTTA CGGCGCGTGT CGATCCACTC ATTGGTCTTG AGCACGCACT GCCCTTTCTG
GGGTTTGAAC TGACCCTGCT GCTGATCGGT GCGGCATCCA CCCAGATGCG CACATTTTAC
GAGCACGTGC TCAACGCGCG CCTGGCGCAC ACCATCAATA CCGAGATTAT CCGCAAAGCT
CTGGCGCTCG ATCTGCACTA CTTTGAGGAT GCCAGTTTCT ACGATAAACT GCAAAATGCC
CGGCGTGAAG CCGACTTCCG CGCACTCGGC ATTATCAATG GGTCGTATAA CGTGGTGCAG
AATCTGCTGA CGCTTCTCTC GTTCGCGGCG CTGCTCCTGG CGTTCAGCCC GTTGATTACG
CTGGTGCTGT TTGGTGCGAC GATTCCAGCA TTTGTGGCGC AGGGACGGTT CAGCAATCTC
TATTTTCGCC TGCTTACCTG GCGCGCGCCG GAATTTCGCC GAATGCAATA CCTTGAACAT
GTGCTGACCG TCGATAGCAG CGTCAAGGAG GTCAAACTGT TCAATCTGGG CGAGCCGTTG
TTGAAACGCT ATCACGATGC GTTTCATGTG TTCTTCCGTG AGGACGTTGA CCTGGCGCGT
CGCCGTTCGT TCATCAGTGT GGGCTTGGGC GCGCTTGCCA GCCTCAGTTA CTACGGCGCT
TACGCCTGGA TCGTGTTCCT GACGATTGGT GGCGCTATTA CGCTGGGCGG CATGACCTTC
TATCTGACCC TGTTTCGCCA GAGTCAGGGT GCGTTTCAGG GTTTGTTCGG CAGTGTCACT
CGCCTGTACG AGCACGGGCT GTTCATGGAG AACCTGTTTA CGTTTCTGGG TCTGCAACCA
CAGATGACGT CGGCAGCGCA GCCGGTTCCG GTTCCACCAC AATTGCAGCG CGGTCTCGAG
TTTCGCAATG TGTCGTTTCG TTACCCAGGG CGCGACGATT GGGCGCTGCG CGAGATCAAT
CTGACGATTG CGCCGGGCGA AAAACTGGCG CTTGTCGGTC CGAACGGCGC CGGCAAGACG
ACGCTGATCA AGTTGATGAC CCGTCTGTAC GATCCGACTG AGGGGCAGAT TCTGCTCGAT
GGAGTGGACC TGCGCGACTA CGATCTCGAT GAGGTGCGTC GTCGTATTGG CGTGATCTTC
CAGGATTTTG TCCGTTATCA GTTGACGGTG CGCGAGAATA TCGGCTTTGG TCAAATCGAT
CATCTTGACG ACGCGCAGCG GATCGGCGCA GCGGCGCAGC GCGGCGGCGC CGATGATGTT
GTGGCGGTGC TTCCTGGCGG CATGGAGACG ATGCTCGGAC GCTGGTTTGA GAATGGTTTT
GAACTCTCCG GCGGGCAGTG GCAGAAAATT GCATTGAGTC GTGCGTTTAT GCGTGATGGC
GAGGTGCTGG TGCTCGATGA GCCGACCGCT GCCCTCGACG CTGAGCGAGA GTACGAGATT
TTTCAGCGAT TCCGCGAGTT AACGGCGGGA AAGATCGCAG TGCTGATCTC CCATCGATTC
TCGACCGTGC GCATGGCGGA TCGGATTGCA GTCATCGAAG GCGGGCGGAT TACGGAGATC
GGTTCGCACG CCGAACTGTT GGCGCGCGGC GGAACGTATG CCCGCCTGTT CGAGATGCAG
GCAGAGGGGT ACCGTTGA
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| Protein sequence | MWDVPGRRRA RRPFEPETAA TWSERMAQIR DAFGNIPGAF RLVWRADRRS TIMMAILTLI
AAALPAAQAW AGALIVDSVV NSFTARVDPL IGLEHALPFL GFELTLLLIG AASTQMRTFY
EHVLNARLAH TINTEIIRKA LALDLHYFED ASFYDKLQNA RREADFRALG IINGSYNVVQ
NLLTLLSFAA LLLAFSPLIT LVLFGATIPA FVAQGRFSNL YFRLLTWRAP EFRRMQYLEH
VLTVDSSVKE VKLFNLGEPL LKRYHDAFHV FFREDVDLAR RRSFISVGLG ALASLSYYGA
YAWIVFLTIG GAITLGGMTF YLTLFRQSQG AFQGLFGSVT RLYEHGLFME NLFTFLGLQP
QMTSAAQPVP VPPQLQRGLE FRNVSFRYPG RDDWALREIN LTIAPGEKLA LVGPNGAGKT
TLIKLMTRLY DPTEGQILLD GVDLRDYDLD EVRRRIGVIF QDFVRYQLTV RENIGFGQID
HLDDAQRIGA AAQRGGADDV VAVLPGGMET MLGRWFENGF ELSGGQWQKI ALSRAFMRDG
EVLVLDEPTA ALDAEREYEI FQRFRELTAG KIAVLISHRF STVRMADRIA VIEGGRITEI
GSHAELLARG GTYARLFEMQ AEGYR
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