Gene Rcas_0527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0527 
Symbol 
ID5537990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp689669 
End bp691735 
Gene Length2067 bp 
Protein Length688 aa 
Translation table11 
GC content64% 
IMG OID640892689 
Productpeptidase S8/S53 subtilisin kexin sedolisin 
Protein accessionYP_001430675 
Protein GI156740546 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1404] Subtilisin-like serine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.841411 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGTC TGCTCGTATT CGTCGCGCTT ATTTTCACGC TGGCGCCGCT CCCCAAACCC 
ATCGCAGCCA GCGATGCCGC CGATGAACTC GTGGTGCGCC TCGCCGAGGG TTGGGCGCTC
ACTGCCAGCG CGCGCGTTCA CGGTCCGTTT GCTGCGCCGC TCAACGCCCT GCTGGCGCAG
GCTGACGTTC GTGAGGCGCA GGCGCTCGGT GGCGGCGCCT ATCTGCTCCG GTTCGCGCAT
TCATTCAATC ACCGCACGAT GATCGCGCGC CTGATCCGCA CACCCGGCGT CGTATATGCC
GAACGGAACC ATGAACGTCA GGTGTTGCGC GTTCCGAACG ACGAAGACAT CGACCGTCAG
TGGTCGCTGG CGGTCATTCA GGCGTTCGAT GCCTGGAATA TCACAACCGG AAGCGACATT
ATCATTGCCA TTCTCGACAC CGGCGTGTCG CCGTCGCATC CCGATCTACG CGGGCGCGTG
CTGCCCGGTT TTGATTTTGT GAATAATGAC GATGATCCAC GCGACGACGA CGGGCACGGA
ACGTTCACCG CCGGTGTCGC CGCTGCCGAG GGGGACAATG GCATTGGGGC GGCTGGCGTC
TGCTGGCGTT GCCGCATTCT TCCGGTGAAA GTGCTCAACC GGCGTGGCCG AGGGAACGAT
GCGGCAATTG CCGCCGGCAT TCGGTTTGCG GTGGATCGCG GCGCGCGCAT TATCAGTATG
AGTTTCGGCG GACCGGACGA CTCGCGGGTG TTGCGCGAAG CGGTTGCATA TGCGCTGGAG
CGCGATGTAC TCCTGGTGGC TGCATCAGGC AACGGTCAGG CGGAGGGCAA TCTTCCCAAC
TACCCTGCCG CTTATCCGGG CGTTCTGGCA GTATCGGCAA CCGGACCGGA CGACGCAGTC
ACGAGTTTTT CGACCACGGG TGATTTTGTG GCGCTTGCCG CGCCAGGCGC CGGAGTGTGG
AGCACGACGT GGCGACGTCC AACCGGCGAC ACGTATGGTT TTGCCGATGG CACATCCGCC
GCCTGCCCGC ACGTAGCCGG CGCGGTGGCG CTGGTGTGGA CGGTGCGCCC GGAACTGGCC
GCCCGTCAGG TTGCCGAGGT GCTGATGCTC GGCGCCGATG ATCGTGGTGC GCCTGGAAAA
GACCCGGCGT ATGGATACGG ACGCCTGAAT CTGTTTCGGG CGCTCCAGGT TGCGCTTGAC
CCCAACCTTC TGATCCGTTC ACGGATCGAG GGGGTTGTGC GGAGCGTCGC TCCCGATCAA
ACCACGATTA CACTGAGTTC CGGGCAGGAA ACTCGCCCTG ACCCGAATGG CTTCTACCGT
TTCGAGAACC TTCCCGCCGG TCAGTACACG ATTATTGCGC GCACACCCTC TGGCGAGTCG
TTGCAACACG AGGTGTCGCT GACCGGCACG GCGCTCAGCG TCGCGCGCGT CGATTTTGCG
CTGGATAGCG CTGCCGTTGC CGGCGCCGCG TTTGCGCCGG TTTCACCGCA GCGCGGCGCG
GTCTATTTTC CCGAAACCGG GCATACGCTG CGCGGTGTTT TCCTTTCCTA TTGGCGAGCG
CATGGCGGGT TGCCGGTCTT TGGCTATCCG ATCAGCGAGG AATTCATTGA GCGTGGCGAA
GATGGGCGTG AGGCGCTGGT GCAGTACTTC CAGCGGCACC GTTTTGAGCT TCGCCCCGAA
AATCGCCCGC CGTACAACGT TCAGTTGAGC CGCATGGGCG ACATCATCCT GCGCGCGCGC
GGGGTGGACT GGTTTGCGCT GCCGAAAGGC GCACCCACAT CAGGGTGCCG CTATTTCCCC
GAAACGGGGC ACAGTCTCTG TGAGCCATTC CTCAGCGCAT GGCGTTCCAA CGGGCTGGAG
TTCGACCGCC GGCGTGGCGC GTCGGAAGCC GAGAACCTGG CGCTCTTCGG CATGCCGATT
TCTGAACCGC AAATCGAAAC GCTGCCGGAC GGTCGCCTGA TCCTGGTCCA GTGGTTTGAG
CGCGCGCGCT TTGAGGATCA CGGTCCCGAC GGCATTCTGT TCGGGTTGCT CGGCGAAGAG
TTGGCGCGCG TTCGCGGATG GCGCTGA
 
Protein sequence
MQRLLVFVAL IFTLAPLPKP IAASDAADEL VVRLAEGWAL TASARVHGPF AAPLNALLAQ 
ADVREAQALG GGAYLLRFAH SFNHRTMIAR LIRTPGVVYA ERNHERQVLR VPNDEDIDRQ
WSLAVIQAFD AWNITTGSDI IIAILDTGVS PSHPDLRGRV LPGFDFVNND DDPRDDDGHG
TFTAGVAAAE GDNGIGAAGV CWRCRILPVK VLNRRGRGND AAIAAGIRFA VDRGARIISM
SFGGPDDSRV LREAVAYALE RDVLLVAASG NGQAEGNLPN YPAAYPGVLA VSATGPDDAV
TSFSTTGDFV ALAAPGAGVW STTWRRPTGD TYGFADGTSA ACPHVAGAVA LVWTVRPELA
ARQVAEVLML GADDRGAPGK DPAYGYGRLN LFRALQVALD PNLLIRSRIE GVVRSVAPDQ
TTITLSSGQE TRPDPNGFYR FENLPAGQYT IIARTPSGES LQHEVSLTGT ALSVARVDFA
LDSAAVAGAA FAPVSPQRGA VYFPETGHTL RGVFLSYWRA HGGLPVFGYP ISEEFIERGE
DGREALVQYF QRHRFELRPE NRPPYNVQLS RMGDIILRAR GVDWFALPKG APTSGCRYFP
ETGHSLCEPF LSAWRSNGLE FDRRRGASEA ENLALFGMPI SEPQIETLPD GRLILVQWFE
RARFEDHGPD GILFGLLGEE LARVRGWR