Gene Rcas_0524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0524 
Symbol 
ID5537987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp684595 
End bp685563 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content62% 
IMG OID640892686 
Productputative esterase 
Protein accessionYP_001430672 
Protein GI156740543 
COG category[R] General function prediction only 
COG ID[COG0627] Predicted esterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.629135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCACATG TTGCGCCGCC GGCGTTGCCG GTCGTGTACG ATGCGCGCGC GCGCTGTGTG 
ACGTTTTTTA GTCCGGCGCT CGGTCTTTCG CGGAGTTTTT ACATCTATAT CCCTCCCGAC
GTCGATGACG ATCATCCGGC GCCGGCGCTC TATCTGCTGC GCGGGCATGA ACGCGAGTGG
ATCAATCCGT TCGAGGATTC ATCGCGTGGC GGCAGGAATG TCATCGATGT CTATGAAGCA
CAGCGCGCCG CCGGGCGCAT TGCTCCGCTG GTTCTGGTCT TTCCTGGCAC ATCGAGTGAT
GATAACCGCA TCCCTGGCAT GCTGCTCAAT ATGTGCGCGC CGCACCTGGC ATATGGCGCC
TCCGGCATTG GCAGTGGTCG CTTCGCCGAT TATTTTTTCC ACGATCTGAT CCCCTATGTC
GAGAGTCATT TCCCGGTCAT CGCCGGCGGT CGGGCGCGCG GTATCGTCGG TTTCTCGCTC
GGCGGCGCGA TGGCGCTGTC GGTTGCGGCG CGCCGCCCCG ATCTGTTTGC CTGCGCCGGC
GCATACGATG GCACATTCCT GTACGCCTGC AACCGGGGAC GGAGCATTCG CAAGCAGGAT
CGGGTAGTTG CCAATCCCAT ATTCGACGCA GCGTATGGCG TCCCGCGCGA CCGTGCGTTC
GTTGCGCAAC ACAATGCCGC GAACCTGATC CTGCGCGGCA ATCGGGAGGC GCTCGCGCGC
ATCACCTGGA TCGTGGCATA TGGTCCCGAA TCGCAGGAAC CCTGGCAGTC GAACTACTAT
CGTGGTGAAC ATCTGCTGGC ATGCCTGCGC GCGCGTGGTC TTGCCAATGC GCTGGACAAC
CCGGCGCTCC CCGACGGCGA CCATAGCTGG CGCACCGCCG ACCGGTTTAT GAACCTGACG
CTGCCGCTGT ATGATCGCGC ACTGCGCCAG GAATCACTAA GGGCGCCTGA CTGTGTCAGA
CACCCTTAG
 
Protein sequence
MPHVAPPALP VVYDARARCV TFFSPALGLS RSFYIYIPPD VDDDHPAPAL YLLRGHEREW 
INPFEDSSRG GRNVIDVYEA QRAAGRIAPL VLVFPGTSSD DNRIPGMLLN MCAPHLAYGA
SGIGSGRFAD YFFHDLIPYV ESHFPVIAGG RARGIVGFSL GGAMALSVAA RRPDLFACAG
AYDGTFLYAC NRGRSIRKQD RVVANPIFDA AYGVPRDRAF VAQHNAANLI LRGNREALAR
ITWIVAYGPE SQEPWQSNYY RGEHLLACLR ARGLANALDN PALPDGDHSW RTADRFMNLT
LPLYDRALRQ ESLRAPDCVR HP