Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0513 |
Symbol | |
ID | 5537976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 667640 |
End bp | 668908 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640892675 |
Product | Pyrrolo-quinoline quinone |
Protein accession | YP_001430661 |
Protein GI | 156740532 |
COG category | [S] Function unknown |
COG ID | [COG1520] FOG: WD40-like repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATACCA CCGGGCAACG TGGCTTGTGG ATGGTCGCCA TTCTCGCTCT GCTTGGCGCG ATTGGCTATG TCGCGCTGCG TCCGCCCTCA CCGGCGTCGT TCGATGCCGC CCTCCCCGCT CCCACCGTTG GGGCAAACCT CGCAGCGCAG GCAGCGCCGG ATAACCCCTT TGCTCAATCC GCGCCGGCAT CCCCTGATAG TCCGCCTGTC GGCGAATGGT CGATGGAAGG GTTGAACCCT GCGCGAACGC GCGCCGTCGA GACGCCGATT GCGCCACCGC TCAATCAGCA GCGTGTCATT GTCACCGCTT CGTTTGAAGA AGGCGTGTCG CCGCCGGTGA TTGCTCGCGG TCTGATGCTG CTGGAAACGA AAGATGCCCT GAGCGCCATC GATCTGCGCA CCGGTCGGCA ACGCTGGGCG TACCGCCAGA AAGGCGCCTA CATATCACCG GCAATCGCGG GCGATACCGT CTATTTCCGC GCCGAACAGG CAAACCAGGG GCAACTGGTG GCGCTGGAGT TGAGCAGCGG GCGGCAGCGC TGGGCGTTCA CGCCCAAACG TCTGAGCGCT GCCGCCAACA ACTACTTCGG CGGGCATCTG ACCTCGCCGG TCGTGGTGGA GGGCGTCGTC TACGTTGGCG CCGGAAAAGA ACTCTACGCC CTGGACGCCA TCAGCGGCAA GATGCGCTGG GAATTCAGCG CACAGGATTT TATTACTTCA TCTGCGGCAG TTGCCGACGG GCGTGTCTTC GTTTCCGACT TTTCGTATTT CTATGCGATT GATCTGACCT CAGGAGGGCT TATCTGGTCG TACCCGGCGC ATTCTGCCGT CTATTTTTCT TCGGTGGCGG CGGGTGATCT GGTGTTGATC AGCAGCGGGC AAAATCTGAT TGCGCTCGAT GTGCGCAATG GCGCGCGTCG CTGGGAAAAG AGCGTTTCCG GCAAATCGCT CATTCCGGCC GGAGCGCAGG GTGATACCGT GTTTGTTAAG ACGACGAACG AGTTATTTGC GCTCGATCGC AGTGATGGGC GTGAGTTGTG GTCGTTCCGT GATGTTAACT ATGTCTCGCT GCCTGCGCTG ACGCAGGAGT ATGTGTTTGT TGTCAACGGC ATGGGTGCGG GTGCGTCTGT GGTGGCGCTC GACATGACCA CCGGCGCAAA CGTCTGGTCG CAGCCGGTGC CGCGACTGGC AACTACGGCG CCGGTGATTG CCGGGCGCGC GATCTATGTG CGCACCACCG ATGGCAGGGT CATCGAACTG CTGAGTTGA
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Protein sequence | MHTTGQRGLW MVAILALLGA IGYVALRPPS PASFDAALPA PTVGANLAAQ AAPDNPFAQS APASPDSPPV GEWSMEGLNP ARTRAVETPI APPLNQQRVI VTASFEEGVS PPVIARGLML LETKDALSAI DLRTGRQRWA YRQKGAYISP AIAGDTVYFR AEQANQGQLV ALELSSGRQR WAFTPKRLSA AANNYFGGHL TSPVVVEGVV YVGAGKELYA LDAISGKMRW EFSAQDFITS SAAVADGRVF VSDFSYFYAI DLTSGGLIWS YPAHSAVYFS SVAAGDLVLI SSGQNLIALD VRNGARRWEK SVSGKSLIPA GAQGDTVFVK TTNELFALDR SDGRELWSFR DVNYVSLPAL TQEYVFVVNG MGAGASVVAL DMTTGANVWS QPVPRLATTA PVIAGRAIYV RTTDGRVIEL LS
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