Gene Rcas_0448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0448 
Symbol 
ID5537911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp564908 
End bp565531 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content60% 
IMG OID640892611 
Producthistidinol-phosphate phosphatase family protein 
Protein accessionYP_001430597 
Protein GI156740468 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0241] Histidinol phosphatase and related phosphatases 
TIGRFAM ID[TIGR00213] D,D-heptose 1,7-bisphosphate phosphatase
[TIGR01656] histidinol-phosphate phosphatase family domain
[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACAG TCTTCCTGGA TCGCGATGGT GTCATCAACG AAAATCGTGT CGATCATGTC 
AAGTCGTGGC AGGAGTTTGT GTTTTTGCCG GGTGCGCTGG CGGCATTGCG CTGGCTCAAC
CTTGCCGGTT TTCGCGTCTT TGTGGTGACC AATCAGGCGA TTATCGGGCG TGGCATCGTT
CCGGCGAGCG TGGTCGAAGA TATTCACACC CGCATGCAGG TGCAGGTCGC CCTGCATGGA
GGGCAGATCC ACGACATCCG CTACTGCCCG CACGACGATC ACGCGAAGTG CGATTGTCGC
AAGCCGCGCC CCGGCATGTT GCGCGATCTG GCGCGTCGGT GGAACGTCGA TCTCGCGCAT
GCCTACCTGG TTGGTGATGC ATGGAGCGAT ATTGCCGCCG GGCATGCGAT AGGAATACGT
AGTATACTGG TGCGTACAGG ACGAGGTGCG CAGCAACTCG CGCGCCCTGA AACACAGCAG
CATCCGCCGG ATCACGTTGC GAACGACTTG CTGGGAGCGG TTGCGTGGAT CATGCACCAG
GAAGAAGTCG CGCTGACGCG CCGAGGGGTG GCGCAATCGC TGTACGAGCG TTCTGTCGGA
GCGCCGTTCT TTTCGGTTCG ATAG
 
Protein sequence
MQTVFLDRDG VINENRVDHV KSWQEFVFLP GALAALRWLN LAGFRVFVVT NQAIIGRGIV 
PASVVEDIHT RMQVQVALHG GQIHDIRYCP HDDHAKCDCR KPRPGMLRDL ARRWNVDLAH
AYLVGDAWSD IAAGHAIGIR SILVRTGRGA QQLARPETQQ HPPDHVANDL LGAVAWIMHQ
EEVALTRRGV AQSLYERSVG APFFSVR