| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0440 |
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| Symbol | |
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| ID | 5537903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 554103 |
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| End bp | 556220 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640892603 |
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| Product | hypothetical protein |
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| Protein accession | YP_001430589 |
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| Protein GI | 156740460 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.202609 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTGACG TACCGCGCTT CACCTGGTTC TCTCTCCTCA TAATCGCCCT GGCAGCGCTG
CTGGTTGCTA TGGGTGCGAC TGTTGTCGCC GCTCCGCCAC TCTGCGACAT TGGCGCTGGC
GAGGATGTCG GTTGCGCCCG CGGTTTCGAG ACGCGCGAAG GCGATGGGTA TGGGTCGTTT
CGCTGGACGG ATGGGCACGC CGGTGTGACG CTTGCCGCTG CCGGGTATGG TGGTCTGTAC
ATCGTTGATG TGGTCATGGC GGCGCCCCGT CCACCCTATG CGCCGTCACC GTCTGTCACA
CTCTTGATCG CCGGCGTGTC GGTTGAGGTC GCGCCAGCAG ATGCGACCCG GCGCTACCGC
TTTCTGCATC CGCCCGGTTT TCCATCCGGG GATGCCATTC GCCTGACGAT CCAGAGCGAT
ACCTGGAAGC CCGCCGACGA TCGCCGCAAT CTTGGCGTTC TTGTGTATCT GGCGCGCGCC
AGGCCGCTGG GTGCACCGGC GCTGCCGTCG GTGCAGCATA CTCTGGCGCT GCTGGCGATT
GGTCTTGCGG CTGTGCGTGT CGGGCGTCGT GTGGCGCACC CTGCAAGACA AACCGCCATC
TCGCTGACAA TGATTGGGGT GTGTGGCGCG CTCTGGGGCT GGCTGCCGAC GCAAATCGCG
CCATTCCTGC CGATCTACGC GCTTTTGCTG GGGAGCGCAG CGCTGCTGTT CGCTCGCGCA
GAACGTCGCG CGCCGCCACA ACAACCAGTA ACCTGGCGAG AACCTGCGTG GCTGGCGGCG
CTCGGCGGGG TGGCGCTCGA TGCACTCGTT GTCGCAGGCA TTGCGCGTGG GGCGTGGGTT
GTGCCGGTCA TCGGAGCGCA GGCGGCGCTC GTCGTGTGGG GAACATGGAG TGCTGTCGGA
CGCCTCTGGT CGCTCACCGA TCTGCTGAGA ATCGCGCTGG CGGTTCGCCT GCTGGCGTTG
GCCTCACGAT TGCTCAGCGG CGAGATCGGC AGTGACCCAG ATGTTGAACT CTTCTACAAC
TACGGGCGCG CCACGCTGGA ACTCGGTCTG CCCATTGTCG AGTATCCGTC TGGCGCTCTG
ATACCCTGGG CATTGCTGGC GCTGCCTGGC AGCCGCGAAC TCTTCGCGCT GGCATTGCCG
CTCGTTAACA CCGCCGCCGA TCTGGTCATC GTCTGGGCAA TCTGGCAGAT CGGTGCGCAG
CGCCGTGCAA CGGAAGCAGG TGACAATGCT GCGGCGCCGG CGTGCTTCTA TGCACTGTCG
CCGCTTTTGC TCCCCTTTTG GCACGGCAAG TACGACGCGC TGCCAACGGC GTTGCTGGCG
CTTGGGTTGG TGGCATTCGC GCATCGACGC ATGGGTTGGA GCGGTGGAGC GCTTGGCATC
GGCGGTGCGT TGAAATGGAC CCCCTGGCTG GCGGCGTTCG CGCTGGCGCT TGGACTGGAG
CGGGCGCGTT CCCGCCATCC GTTTGCGCTG TTGGCGTTTG CGGCTGGCGG ATTCATTGCA
GTGGCAGCAA CATCGATCCC ATTTGCGCTG ATCGACTGGC GCCGCTTTCT GGCGCCGTAC
ACGCTCCAGG GTGGGCGCGC CATCACCGGT GAAAGCCTCT GGTTCCTGGC GCTCCTGATC
AGTACGCCGG AGCACCGGTT GCGCCTGCCG GCGCCGTGGG GTGCAGTCGA GACCGGACAA
TGGTTCCTGG GAGTCGCTGT TGCCGTTCAA GGAGCGATGC TGGCAGGCTT AATGCTCAGC
GCACTCCGAT CACCGTTACC GGCGTGGCGT CTCATCGCGC TGGCGGCGTT AATGCCAGCC
GCTTTCCTGC TGCTCAACCG GGTCTTTAGT CCACAGTACA TGGTCACAAT AACCGTAGCG
GCGCTGATCG CCAGCGCCGC CGTTGGTGCT CCTCCACATG CTATCCGAAG GATTATTCTG
TTGTTGGCCA TTGCTCAGGC TGCCAATCTC CTGGTCTGGC CCAACACCGT TTCCTGGTGG
ACCCTGGCGT CGGCAATCAT GTTCGTGACC ACCCTGAGCG CGCTGGGGTT GCTCGTTCTG
ATGGCGCACG ACGCGCCATC GTTAGCGTCC TGCTTCCATC GCTACAGGAA ACGCCCCGAT
CTGGAGCATC ATCGCTGA
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| Protein sequence | MRDVPRFTWF SLLIIALAAL LVAMGATVVA APPLCDIGAG EDVGCARGFE TREGDGYGSF
RWTDGHAGVT LAAAGYGGLY IVDVVMAAPR PPYAPSPSVT LLIAGVSVEV APADATRRYR
FLHPPGFPSG DAIRLTIQSD TWKPADDRRN LGVLVYLARA RPLGAPALPS VQHTLALLAI
GLAAVRVGRR VAHPARQTAI SLTMIGVCGA LWGWLPTQIA PFLPIYALLL GSAALLFARA
ERRAPPQQPV TWREPAWLAA LGGVALDALV VAGIARGAWV VPVIGAQAAL VVWGTWSAVG
RLWSLTDLLR IALAVRLLAL ASRLLSGEIG SDPDVELFYN YGRATLELGL PIVEYPSGAL
IPWALLALPG SRELFALALP LVNTAADLVI VWAIWQIGAQ RRATEAGDNA AAPACFYALS
PLLLPFWHGK YDALPTALLA LGLVAFAHRR MGWSGGALGI GGALKWTPWL AAFALALGLE
RARSRHPFAL LAFAAGGFIA VAATSIPFAL IDWRRFLAPY TLQGGRAITG ESLWFLALLI
STPEHRLRLP APWGAVETGQ WFLGVAVAVQ GAMLAGLMLS ALRSPLPAWR LIALAALMPA
AFLLLNRVFS PQYMVTITVA ALIASAAVGA PPHAIRRIIL LLAIAQAANL LVWPNTVSWW
TLASAIMFVT TLSALGLLVL MAHDAPSLAS CFHRYRKRPD LEHHR
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