Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0436 |
Symbol | |
ID | 5537899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 549655 |
End bp | 550269 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640892599 |
Product | hypothetical protein |
Protein accession | YP_001430585 |
Protein GI | 156740456 |
COG category | [S] Function unknown |
COG ID | [COG4636] Uncharacterized protein conserved in cyanobacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0970705 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGTCG AAGCGCACGC CGATTCGTTG AGAATAACCC ACAGTGACGG GCTGGAAGTC GATCTCGCGC CGCTTCAGGC TCTCTGGACG GAGGAGCAGT ATCTGCGTCT TACCGAACAG ACCAACCACC TGATCGAGTT TGTCGACGGT TCTATCGAGG TGCTGCCGAT GCCCACCAGC CGCCATCAGA CGATGCTGCT CCTCCTGTAT GAACGACTAA AAGCGGCAGT GCAGCCAACG GGAGGAAAAG TGCTGGCGGC GCCGCTGCGG TTGCGCCTGC GACCTGGCAA GTTTTGTGAA CCTGATATTG TGTTGTTGCA GTCTGCCGAC GATCCGCGTT ATCAGGACGC CTTCTGGCTC GGCGCCGATC TCGTGGTTGA AGTCGTCAGT CCCGACCAAC CGGAGCGAGA TACCAGAGAG AAAGTGCGCG ACTATGCCGA GGCAGGCATC CCCGAATACT GGATTGTCAA TCCGCTCGAT GAGACGGTGA CGGTGTTGGC GCTTGCAGGA GAAGCGTACA CGCCGCACGG CGTCTTTCGT CGAGGTCAGC GCGCGCTTTC AAAATTGCTC GACGGTTTCG GCGTCGCAGT GGATGATATT TTCGATGTGC AATAG
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Protein sequence | MTVEAHADSL RITHSDGLEV DLAPLQALWT EEQYLRLTEQ TNHLIEFVDG SIEVLPMPTS RHQTMLLLLY ERLKAAVQPT GGKVLAAPLR LRLRPGKFCE PDIVLLQSAD DPRYQDAFWL GADLVVEVVS PDQPERDTRE KVRDYAEAGI PEYWIVNPLD ETVTVLALAG EAYTPHGVFR RGQRALSKLL DGFGVAVDDI FDVQ
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