Gene Rcas_0436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0436 
Symbol 
ID5537899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp549655 
End bp550269 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content58% 
IMG OID640892599 
Producthypothetical protein 
Protein accessionYP_001430585 
Protein GI156740456 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0970705 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTCG AAGCGCACGC CGATTCGTTG AGAATAACCC ACAGTGACGG GCTGGAAGTC 
GATCTCGCGC CGCTTCAGGC TCTCTGGACG GAGGAGCAGT ATCTGCGTCT TACCGAACAG
ACCAACCACC TGATCGAGTT TGTCGACGGT TCTATCGAGG TGCTGCCGAT GCCCACCAGC
CGCCATCAGA CGATGCTGCT CCTCCTGTAT GAACGACTAA AAGCGGCAGT GCAGCCAACG
GGAGGAAAAG TGCTGGCGGC GCCGCTGCGG TTGCGCCTGC GACCTGGCAA GTTTTGTGAA
CCTGATATTG TGTTGTTGCA GTCTGCCGAC GATCCGCGTT ATCAGGACGC CTTCTGGCTC
GGCGCCGATC TCGTGGTTGA AGTCGTCAGT CCCGACCAAC CGGAGCGAGA TACCAGAGAG
AAAGTGCGCG ACTATGCCGA GGCAGGCATC CCCGAATACT GGATTGTCAA TCCGCTCGAT
GAGACGGTGA CGGTGTTGGC GCTTGCAGGA GAAGCGTACA CGCCGCACGG CGTCTTTCGT
CGAGGTCAGC GCGCGCTTTC AAAATTGCTC GACGGTTTCG GCGTCGCAGT GGATGATATT
TTCGATGTGC AATAG
 
Protein sequence
MTVEAHADSL RITHSDGLEV DLAPLQALWT EEQYLRLTEQ TNHLIEFVDG SIEVLPMPTS 
RHQTMLLLLY ERLKAAVQPT GGKVLAAPLR LRLRPGKFCE PDIVLLQSAD DPRYQDAFWL
GADLVVEVVS PDQPERDTRE KVRDYAEAGI PEYWIVNPLD ETVTVLALAG EAYTPHGVFR
RGQRALSKLL DGFGVAVDDI FDVQ