Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0414 |
Symbol | |
ID | 5537876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 522970 |
End bp | 524505 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640892576 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_001430563 |
Protein GI | 156740434 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACATTG GCGGATTGCT TTCGCGCCAT GCGCGCTATC GTCCCAATCA CACTGCGGTG ATCGTCGGTG ATGTGCGGCT GACCTATTGC GAGTTTAATG CGCGGGTCAA CAAAGTCGCG CATGCGCTCC TGAACCTGGG GCTGGCCAAA GGCGACAAGA TTGCGACAGT GCTGCCGAAC TGCATGGAGT TGCTCGAAGT CTACTGGGCA GCGGCAAAGA CCGGTCTGGT GGTGGTGCCG ATGAGCACCC TGCTGCGCGG TCAGGGGCTG GCATCACTCT TGCGCGACTC GGATAGTGCC GCGGTGGTAA CCGATGCAAC GCATGCGCCG GCGCTCGACT CGGTTCGCGG CGATCTGCCG ATTGCGCAGG ATCGGTTCCT GATCATTGAT GCTCCCGATC AACCGGGATA CCGCGATTAT CAGGCACTCG TTGCGCCGAT GCCAGAGCAC GATCCAACCG GGATTGATCT CCACGCCAAT GATCCATACA ACATTATGTA CAGCAGCGGC ACGACCGGTT TGCCGAAAGG CATCGTGCTC ACGCACGGGG TGCGCGCCGG GTACGGGACA ATTTTTGCGT CGTCGTACCG CATCGTGCCG GAGAGCGTTA TTCTGCATGC GGGCGCGCTC GTGTTCAACG GCGCCTTCCT CACGCTCATG CCAGCATTCT ACCTGGGAAC AACCTACATC CTGATGAAGG CGTTCAATGC CCGCGAGTTG ATCGAGACCG CAGCACGCGA GAAGGTGACA CATATTAAGA TGGTGCCGTC GCAAATCGTG GCGCTGCTCA ACGAACCCGA CTTCGATGAG CAGCATCTGC CGTCAATCGA AATGCTTGGC TCAGTCGGCG CACCGTTGCA CATGGAGCAC AAACTCGAAC TCGAACGGCG CTTTCCTAAC CGCCTCTACG AACTGTACGG ACTGACCGAA GGGTTCATGA CTATTCTCGA CAAATACCAC CGGGGAGAGA AACTCGCGTC GGTCGGCGTG CCGCCACCGT TCATGGAGAT CAAGATCATC GACGACCAGC AGCGTGAGTT GCCGCCGGGT GAAGTTGGCG AAATCTGCGG GCGCGGTCCG TTGATGATGA GCGGTTACTA CAAGCGTCCC GATCTGACAG CACAGGCGAT CATCGATGGC TGGCTGCACA GCGGCGATAT GGGGTATGTT GATGAGGATG GATTCCTCTA CCTGGTGGAC CGTAAGAAAG ACATGATTAT TTCTGGTGGC ATCAACGTCT TTCCGCGCGA CATCGAGGAA ATCATCGTGC AGCATCCGGC AGTGCGCGAG GCGGCAGTCT TCGGCGTGCC AAGCGAGAAG TGGGGCGAAA CGCCGCTGGC AGCGGTCATC CTGAAGGCGC CGGGGCTGGT AGCGGCAGAG GAGTTGAAGG AATGGATCAA TGCGCGCGTC GAAGCCGGGT ATCAGAAGGT GTCGAAGGTC GTGATCATGG ACGATTTTCC GCGCAGCGCA GCGGGCAAAA CGCTCAAGCG CGTCATGCGC GACGAGTACT GGAAGGGGCG TGAGAGTAAG ATTTAG
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Protein sequence | MHIGGLLSRH ARYRPNHTAV IVGDVRLTYC EFNARVNKVA HALLNLGLAK GDKIATVLPN CMELLEVYWA AAKTGLVVVP MSTLLRGQGL ASLLRDSDSA AVVTDATHAP ALDSVRGDLP IAQDRFLIID APDQPGYRDY QALVAPMPEH DPTGIDLHAN DPYNIMYSSG TTGLPKGIVL THGVRAGYGT IFASSYRIVP ESVILHAGAL VFNGAFLTLM PAFYLGTTYI LMKAFNAREL IETAAREKVT HIKMVPSQIV ALLNEPDFDE QHLPSIEMLG SVGAPLHMEH KLELERRFPN RLYELYGLTE GFMTILDKYH RGEKLASVGV PPPFMEIKII DDQQRELPPG EVGEICGRGP LMMSGYYKRP DLTAQAIIDG WLHSGDMGYV DEDGFLYLVD RKKDMIISGG INVFPRDIEE IIVQHPAVRE AAVFGVPSEK WGETPLAAVI LKAPGLVAAE ELKEWINARV EAGYQKVSKV VIMDDFPRSA AGKTLKRVMR DEYWKGRESK I
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