| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0389 |
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| Symbol | |
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| ID | 5537851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 488849 |
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| End bp | 491128 |
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| Gene Length | 2280 bp |
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| Protein Length | 759 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640892552 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_001430539 |
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| Protein GI | 156740410 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01073] ATP-dependent DNA helicase PcrA |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.335066 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACG CCTCGACAAT CCTCGACGGC TTGAACCCGG CGCAGCGCCA GGCAGTGACG
GCTGCGCCGG GTCCGGTGCT GGTGCTCGCC GGTCCCGGCA GCGGGAAGAC GCGCGTGCTG
ACCCGCCGCG TAGCGTACCT GATCGGTGTC CACGGCGTCG ATCCGCACCA TATTCTTGCG
GTTACGTTCA CGAATAAAGC CGCGCGCGAG ATGCGCGACC GCCTTGAGAA GTTGCTTGGT
CCTGGCGAAG CGGCGGCGCT GACGGTCGGC ACGTTCCATA GCATCTGTGC GCGCTTCCTG
CGCCGCGATA GTATCCACCT CGGTCGGGAG CGCGATTTTG CGATCTACGA CACGGACGAT
CAACTGCGGG TGATGAAGCG TGTGCTGCGC GACCTGAACC TGGACGAGAA GAAGCACGCG
CCCCGCGCTA TCCACGCGGC TATTTCGCGC GCCAAGAATG AATTGATCGA CCCTGACGCC
TATAGCCGCC ACGCGCACTC TTACTTCGAG GAAGTCGTGG CCCGCTGCTT TGCGCGCTAT
CAAGAACTGC TGCGCGGCGC CAATGCGCTC GACTTCGATG ATCTACTGGT CGAAACGGTG
CGCCTCTTCG AGGAGCATCC GGCAGTGCTC GAACGTTACC AAGAGCGCTA TGGCTTTCTC
CTGGCGGACG AGTACCAGGA CACAAATCGG GCGCAGTATG TGCTGCTGAA GCAACTGGCA
TCCCGGCATC ACAACATCTT CGTCGTCGGC GACGAGGATC AGTCGGTCTA TGCCTTTCGC
GGCGCCGATA TTCGTAACAT TCTGTCGTTC GAGCGCGACT ATCCTGAAGC GCAGGTCATT
CTGCTGGAGC AGAATTACCG CAGCACACAG GCGATCCTCG ATGTGGCACA GGCGGTCATC
AACCGCAGCG CGCAGCGCCG CCGCGACAAG CGCCTCTGGA CGCGCAACGG CGAAGGTGTG
CTGGTGCAGG TTATCGAGGG GTATGATCAG GACGAGGAGG CGCAACTGGT TGCTGGCGAG
ATTGCGCGCC TGATCGCCGG CGGCGCGTAT CAGCCCGGTG ACATTGCGAT CATGTACCGC
ACGAATGCGC AGTCGCGCGC GATTGAGGAG GCATTGATTG CGCGCCAGGC GCCGTACATC
ATCGTCGGCG GCACCCGTTT CTACGAGCGC AAGGAAATCA AGGATGCACT TGCGTATCTG
CGCCTGGCGC TCAACCCGTT CGACGACATC AGCCTGAGCC GGGTGCTGAA CTGGCCCGCG
CGCGGCATCG GGCAGCGCAC CCAGGAAGAC CTGGAACGGC GCGCGGGCGC GGCTGCTGTG
CCGCTCTATG TGATGCTGCA CACGCTCGCC GCCAATGCCG AAGCCGCCGC CGACCAGACA
ACATCCCCCG CGCCCGCGCG CACCGGTGAG ATGCCGTCAC GGGCGCGCAA TGCGTTGCTC
GGCTTTCTGA CACTGATCGA TGAGTCTCTT GATCGGCGGC AGACCCTCTC GCTTGGCGCA
TTGATGGACT GGCTGTTCGA GCGGGTTGGG TTCCGTGAGG CGTTGCGACG CGAGTATGGC
GATGAGGAAG GCGATGACCG CTGGAATAAC GTGATGGAGT TGCGGAATGT CGCCGAGCAG
TATGCCGATC TGCCGCTCGC AAGCCAGTTA TCGACGTTCC TTGAAGAAGT TGCGCTGGTT
TCCGATATCG ATACCCTCCA GGAAGAGCGC AACGCTGTCA CCTGTATAAC GCTTCATCAG
GCGAAAGGGC TGGAGTTCCC CGTCGTTTTC CTGGTGGGTC TCGAAGAGGG GCTGTTGCCC
CACGCGCGCT CGGCCGATGA CCGCGACGCG CTCGACGAGG AGCGACGGTT GTTCTATGTG
GGCGCAACCC GTGCCAAAGA GCGCCTCTAC CTGCTCCATG CCTTCCGGCG CGCCACATAT
GGGCGGACGG AAATCGCTAC CCCGTCGCGC TTTTTGCACG ACATCCCGCC CGATCTACTG
CAACGCGCGC CAAAACGCGG GTATGCCGCT GCACAGATGG TGACCGGTCG CGCGGCAGCG
CTGCGCAATC CCCGTCGCAA CCAGGCGGCG CCTGTATCAC CACATAGCGC TGCCCCCGAT
GGACCGCGCG CCATCTCCTT CTTTGCCGGG CAGAAGGTGC ATCATGCGCA ATTTGGCGAA
GGGATTGTCG TCAGTTCGAA GTTGGTCGAA GGCGATGAAG AAGTGACGGT CGCCTTCGTC
GGCAAAGGGG TCAAACGTCT GCTGGCGAGT TTCGCCAACC TTCAGCACGT CGGGGAGTAA
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| Protein sequence | MTDASTILDG LNPAQRQAVT AAPGPVLVLA GPGSGKTRVL TRRVAYLIGV HGVDPHHILA
VTFTNKAARE MRDRLEKLLG PGEAAALTVG TFHSICARFL RRDSIHLGRE RDFAIYDTDD
QLRVMKRVLR DLNLDEKKHA PRAIHAAISR AKNELIDPDA YSRHAHSYFE EVVARCFARY
QELLRGANAL DFDDLLVETV RLFEEHPAVL ERYQERYGFL LADEYQDTNR AQYVLLKQLA
SRHHNIFVVG DEDQSVYAFR GADIRNILSF ERDYPEAQVI LLEQNYRSTQ AILDVAQAVI
NRSAQRRRDK RLWTRNGEGV LVQVIEGYDQ DEEAQLVAGE IARLIAGGAY QPGDIAIMYR
TNAQSRAIEE ALIARQAPYI IVGGTRFYER KEIKDALAYL RLALNPFDDI SLSRVLNWPA
RGIGQRTQED LERRAGAAAV PLYVMLHTLA ANAEAAADQT TSPAPARTGE MPSRARNALL
GFLTLIDESL DRRQTLSLGA LMDWLFERVG FREALRREYG DEEGDDRWNN VMELRNVAEQ
YADLPLASQL STFLEEVALV SDIDTLQEER NAVTCITLHQ AKGLEFPVVF LVGLEEGLLP
HARSADDRDA LDEERRLFYV GATRAKERLY LLHAFRRATY GRTEIATPSR FLHDIPPDLL
QRAPKRGYAA AQMVTGRAAA LRNPRRNQAA PVSPHSAAPD GPRAISFFAG QKVHHAQFGE
GIVVSSKLVE GDEEVTVAFV GKGVKRLLAS FANLQHVGE
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