| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0378 |
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| Symbol | |
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| ID | 5537840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 474586 |
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| End bp | 476223 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640892541 |
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| Product | TPR repeat-containing serine/threonin protein kinase |
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| Protein accession | YP_001430528 |
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| Protein GI | 156740399 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[N] Cell motility
[R] General function prediction only
[T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0515] Serine/threonine protein kinase
[COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.579733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAAAC GATGGTTTCA GCGTCGCCGA CGTCTCAGTG ACGCACAACT CGGGCGCGAA
TACAGGGTCG ATGATGTCAT CGAACAGCGC TACGAGGTGC AACAGGTGCG CCGCGGGTAT
ATGGGGGTCG TCTACATTGC TTACGACCGT CAGCGCCGTC GGCGTGTTGT TCTCAAGACG
TATCAGACGA AATACATCTG GGACGAAGCA GCCATCCGGC GCTTCAATGC TGAAGCCGAG
CTTTGGATTC GTCTTGGCAG CCACCCCAAT ATTGTTTGCG CCTACGATAT CCACACCTAC
ATGGGGCGCC CCCATGTCGT TGCCGAGTAT GTCCATGGCG GTCCGCTCCG CGCTCTGGTT
GGACGCATTT CACCCCAGGA AGCGGTTGAT TACGGCATTC AGATTTGTCG CGGCATGCAA
CACGCGGTTG AACGATTGAA CCTGGTGCAT CGCGATCTTA AGCCGGACAA TATCATGATC
TCGTTCGATG GGCGCGCTAA AGTGACCGAT TTTGGCTTAT CGAAGGTGCT TCGTCCCTGG
CAAACATTGT TTGATGCTGA ACCTGTCGAA ATGCAAAGCC GCGCCTCTGT GCGCGCCGCG
TTTTCGACTT CCGGGTTGGG GGGAACGCTG CCCTACATGG CGCCTGAATT GTTCAATGGC
GCGGCTGCCA GTGTCTGGAG CGACATCTAT GCGTTCGGTG TCACCCTCTA CGAACTTTTC
GTCGGTCGCC TGCCGTTTGA TGCGCAGCGT GACGATACCC TGATCCGGTT GATTCGCAGA
GCGCCGCCGC CCGATCCACG CCTCCTCGCG CCCAATACGC CGCCCGATGC TGCGGCGATT
GTGATGCGGT GCCTGGCAAA ACGACCTGTT GAGCGGTTTC AATCGTTCGC TGAACTTGAA
ACGGCGCTGC AACAGGTTCG TGAAGCGCTC GTCGGGTCTC CCTTCCCACG CGAGTCGGCA
TTCGATGATC GCGATGAAGC CGAGCATTGG AAGGAGCGCG GACTGGCACA TATGAATATG
GGTGAGTACA AGGAAGCGAT CCGTTGCTTC AAGCGCACGG TGGAACTCGA TCAAGATCAA
CCTGACGGCT GGAACCTGAT TGCGCGCTGT TCCCTTCAAC TCTGGCTCTA TCACGAGGCG
TTGCAGGCGG TCGATGAGGG ATTGCGGCGC GCGGTGAGTC GCACAGAATT TGCGCATCTG
TATGGCGCGC GCGGCGATAT TTTTGCCACG ATGCAGAAGC CGGTCGATGC TCTGGCAGCA
TTCGATAAGG CGCTTTCATA TACTCCCACT GCGCCTGCGC TGTGGCGGAG CAAGGGGGTG
TTACTCCAAC GTCTTGGGGA GATGGCACAG GCTCAGGAAT ACCTGGAGAA AGCCATACAA
CTCGACCCAT CCGATGCCGT CGCCCGTCGC CTTCTTGGCG ATGTGCTCTG TGCCAGTGGA
CGACACAAAT CTGCTGCCAA TTCCTATGCC GAAGCGCTGA AACTCGACCC TCGCTCGGTG
GACGGATGGG TTCGGTATGG GAACTGTTTG TTACACCTGG CGCGGTTGGA AGAGGCAAAG
CATGCCTTCG AAAAGGCGCT TCAGATCGAT CCCGAAAGCA GTGAAGCACG TGCCGGTTTG
CAGCGAGTCA AAAAGTAA
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| Protein sequence | MLKRWFQRRR RLSDAQLGRE YRVDDVIEQR YEVQQVRRGY MGVVYIAYDR QRRRRVVLKT
YQTKYIWDEA AIRRFNAEAE LWIRLGSHPN IVCAYDIHTY MGRPHVVAEY VHGGPLRALV
GRISPQEAVD YGIQICRGMQ HAVERLNLVH RDLKPDNIMI SFDGRAKVTD FGLSKVLRPW
QTLFDAEPVE MQSRASVRAA FSTSGLGGTL PYMAPELFNG AAASVWSDIY AFGVTLYELF
VGRLPFDAQR DDTLIRLIRR APPPDPRLLA PNTPPDAAAI VMRCLAKRPV ERFQSFAELE
TALQQVREAL VGSPFPRESA FDDRDEAEHW KERGLAHMNM GEYKEAIRCF KRTVELDQDQ
PDGWNLIARC SLQLWLYHEA LQAVDEGLRR AVSRTEFAHL YGARGDIFAT MQKPVDALAA
FDKALSYTPT APALWRSKGV LLQRLGEMAQ AQEYLEKAIQ LDPSDAVARR LLGDVLCASG
RHKSAANSYA EALKLDPRSV DGWVRYGNCL LHLARLEEAK HAFEKALQID PESSEARAGL
QRVKK
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