| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0364 |
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| Symbol | |
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| ID | 5537826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 452546 |
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| End bp | 453142 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640892527 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_001430514 |
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| Protein GI | 156740385 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.166619 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGCGC TTTTACGCAT CAGCGATGCG ATCGATGCAC TCAACGAATG GATTGGCGGC
AAGACGGCGT ACATTGTTAT GGCAATGGTC GCTATTGGCT TTGTCAACGT CATTGCGCGC
TACATCGGAC GTTTTATCGG CACCCGCCTG ACCTCCAACG CCATTATTGA ACTTCAGTGG
TACCTTTTTT CGATCATGTT CTTTCTGGGT TTCGCCTATA TTCTGAAACA CAACCTGAAT
GTGCGCGTCG ATTTCTGGTA TGCTAACTGG TCTCCCCAAC GCCGCGCACT GATCGATCTG
GTCGGAACCC TGCTCTTTCT GATCCCCTTC TGTATCCTCG CCATCGTTGT GACGATCAAT
CCGGTCATGT TCTCCTGGGG TCGTCTTCCG AACGGTAACT GGGGGGCATG GGAAATGTCG
CCGGACCCGG ATGGCCTGCC GCGCGCGCCG ATCAAGTCGA TGATCATCGT CGCCTTTGTG
CTGCTGCTCT TGCAGGCGAT TGCGCAGGCA ATCAAATATC TTGCGGTCGT CACCAATACT
GTGCGCGCTG AACAGGCGGC GCAGATCGAA GAATACCATG CGCCTGTAGT CGAATAG
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| Protein sequence | MQALLRISDA IDALNEWIGG KTAYIVMAMV AIGFVNVIAR YIGRFIGTRL TSNAIIELQW
YLFSIMFFLG FAYILKHNLN VRVDFWYANW SPQRRALIDL VGTLLFLIPF CILAIVVTIN
PVMFSWGRLP NGNWGAWEMS PDPDGLPRAP IKSMIIVAFV LLLLQAIAQA IKYLAVVTNT
VRAEQAAQIE EYHAPVVE
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