| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0274 |
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| Symbol | |
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| ID | 5537736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 340472 |
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| End bp | 341791 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640892438 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001430425 |
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| Protein GI | 156740296 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.285114 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTGGC CTGTGTTGGT GCGCCGGGGA TGGCTGGTCG TGCTGTCCTC CCTGCTCCTG
GTGTCGTGCG GGTTGCTCGA ACCGCCGCCG CCGACTCCGA CGCCTGAGCC GCGCGTGTTG
CGCGTCTACA CTGTGCGCGA CCCCGCTATC GAGGGGGTGG TTGAGATTGT CAGCCAGGAG
TTTCGCCGTC GTCATCCCGA CGTGCAGATT GAACTCATCG ACGGCAGCGG CGATTATAGC
GAATTGCGAG GCAGCGCCGC AGCCGGCAAC GTTCCCGATG TCGTCTGGCT GATCGATATG
CTGACCGAGT CGCTGCTCGA GTCTGATCTA ATCATCGATC TGGAAGAATT CGCCAGAGGC
GACGACAGCG TCAACCTGGC AGATGTGCAT CCGATGGCGC TGGAACTCGG ACGATCCCGC
AAGCGCCCTG GTCTGTTCAT GATTCCGGTA TCGCTCGAAA CCATTCAGAT GTATTACAAC
CGTTCGCTCT GGGAACAATC CGGCGCGCCG CTGCCGCGCG ATGACTGGAC ATGGGATGAT
CTGATCGCAG CGTGCAAACG CCTTCAGGGG GCGGCGCCAG GGGTTGATTG CCTGAGTTTC
ACGAATGCCA GCCTAAACGG CTACGCCTGG TGGGTTTACT GGCTGCCGTG GGTGCGCGGC
GCTGGCGGCG ATGCGCTCAG CGCTGACGGA ACGCAATCAA CGTTGAGTTC GCCGCAGTCG
CTCACAGGGT TGCAGGCATA TGTCGATCTC TGGCTCACGC ACAAAATCGC AGCCCCACCC
GCTTCTGGCG GACGCGACTG CTTCGTGGAT CAGACGTGCG CTGCATTCTT TTCGTTTGCC
GGCGTTGCGC AGCGGTACCG CGATCAGATC GGCGACCGCT TCGCCTGGGA TGTGCAATTG
GTTCCGAGCC ATCCGGCAGG ACGCTTCACC GGCATCGGCA CGTATGGCTT CGCCGTAACG
CGCGCCTCGC GCGATCCGCA ACTGGCATGG GATTTTGTGA AAATCTTTAT TGCTCCAGAA
ACGCAGCGTG CGCTGACGGC TGCACATCTG GGCACGCCGG TGCTCCTGTC GTTGAGTAAC
GATCCGACAA TGATGCAACT GCCCGCGCCA CCGGCGAACA TGCGCGCGTT TGTGATCGGG
CGCGAGGCAG GTATTGCACC GCCGCGCTAC CCGACGGCAT GCGGCAGCGT CTACACCGGT
CCGGTGGCGT CGGCTCTCGA TGACGCGCTC AACGCCGCAG TGCGCGGGTT GGCGTCCGTC
GAGGGGGCGT TTGCGGTTGC AGACCGCAAG ATACAGACAT GCCTGGATGC GAATCGGTAG
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| Protein sequence | MQWPVLVRRG WLVVLSSLLL VSCGLLEPPP PTPTPEPRVL RVYTVRDPAI EGVVEIVSQE
FRRRHPDVQI ELIDGSGDYS ELRGSAAAGN VPDVVWLIDM LTESLLESDL IIDLEEFARG
DDSVNLADVH PMALELGRSR KRPGLFMIPV SLETIQMYYN RSLWEQSGAP LPRDDWTWDD
LIAACKRLQG AAPGVDCLSF TNASLNGYAW WVYWLPWVRG AGGDALSADG TQSTLSSPQS
LTGLQAYVDL WLTHKIAAPP ASGGRDCFVD QTCAAFFSFA GVAQRYRDQI GDRFAWDVQL
VPSHPAGRFT GIGTYGFAVT RASRDPQLAW DFVKIFIAPE TQRALTAAHL GTPVLLSLSN
DPTMMQLPAP PANMRAFVIG REAGIAPPRY PTACGSVYTG PVASALDDAL NAAVRGLASV
EGAFAVADRK IQTCLDANR
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