| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0230 |
|---|
| Symbol | |
|---|
| ID | 5537692 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 286674 |
|---|
| End bp | 288101 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640892394 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001430381 |
|---|
| Protein GI | 156740252 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5002] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTTAGCG GGTTGCGCTT GCGACTCTCG CTGGTATATG CGCTTGCGGC GCTGATCCTC
GTCGTGCTGA TCGGCGGCGG CGCGTACCTG GTGGTGGCGC GCTATTTCTC GAACGTCACC
GACCTGGCGC TGCGCCACAA AATGGCGCAC GAGTTTCATG CGCTTGGCGC GCCGCTGCCT
CCTGATCTGG CAAACGCCGA CCGCGACTGG TCGGTGATTC GCAGAGAGAT TGCGCCGCTT
CCCTTTGTTC AGTCCAACCC GCAGGTCGAG CGGCGCGAAG AGGAAGAGAA AATCAGACCA
GGCGACGACG AACGCGGGGA TGCAGAACTC CCGCGCGCCC TGACAACGCC GGTCGATGCG
GCGGAACTGG CGGCGATCGT TGTCCTGCCT TTGGATTCAT CGGGACGATT GCTCTTCAAC
CCAAACAATC TCGACCTGCC GCTGGAACCC GACCAGGTTG CGTTTCAGGC GGCGCTGGCG
AGAGGCAGCG ATCTGCGCAC GATCACAATG AATGACGGAC GGCGGGCGCG CCTGCTGACC
TATCGCCTTA CCCGCGCCGA CGGACCGGCA GCGTTGCAAC TGGCGCGTGA ACTGAGCGAT
CAGGAGCAGG TGTTAAGCCA GTTGATGCTG GGGTTGATCG GTCTGGGAGC ATTCAGTATG
GCGCTGGTCG GCGCGGCAAG TTGGTGGCTG GCGGGGCGCG CATTGCGTCC GGCACAGGAA
GCGTGGGAGC GGCAGCAGCG CTTCATTGCC AGCGCCAGTC ATGAATTGCG CGCGCCGCTC
ACCCTCATTC GCGCCAGCGC CGAGGTTGCG TTGCGCGACA CTCCCTCAGA TACAGCAGAT
CAGTACGAAC TGCTGGGCGA TATTCTGGCA GAAAGTGACC ATATGCGCCG CCTGGTCGAT
GACCTGCTGA CCCTTACCCG CCTCGACAGT GGGCAACTCA AACTGGTGAT AGAGCCGGTT
AATCTGGCAG ATCTGCTGAG CAGGGTACAC CGCCAGGTCG CGCGCCTGGG AGAACAACGG
GGTATCACCA TCGAACTCAC GACTGTCGGC GGAGTCGTTC AGGCAGACGC CGAGCGTCTG
CAACAGGTTC TGTTGATTGC GCTCGACAAC GCGCTGCGCC ACACCCCCTC CGGCGGAACG
ATCACCCTCG CTGCGGCGCC GACAGGACGC ATGGTTCAGA TCACCGTCAC CGACACCGGT
AGTGGCATCG CGCCGGAACA CCTGCCGCAC ATCTTCGAAC GGTTCTATCG GGCGGATCCG
GCGCGCGGGC GGGAGAACGG CAACGCCGGG CTGGGTCTTT CCATCGCCAA AGGACTGGTC
GAGGCAATGC ACGGGCGCAT CACGGTGACG AGCGCCCTCG GCGCCGGCAC AACCGTGTCA
GTTGCGCTGC CGCAAGGTGA GACGACCGTC GCTGCCAATG ACCTGTGA
|
|---|
| Protein sequence | MFSGLRLRLS LVYALAALIL VVLIGGGAYL VVARYFSNVT DLALRHKMAH EFHALGAPLP
PDLANADRDW SVIRREIAPL PFVQSNPQVE RREEEEKIRP GDDERGDAEL PRALTTPVDA
AELAAIVVLP LDSSGRLLFN PNNLDLPLEP DQVAFQAALA RGSDLRTITM NDGRRARLLT
YRLTRADGPA ALQLARELSD QEQVLSQLML GLIGLGAFSM ALVGAASWWL AGRALRPAQE
AWERQQRFIA SASHELRAPL TLIRASAEVA LRDTPSDTAD QYELLGDILA ESDHMRRLVD
DLLTLTRLDS GQLKLVIEPV NLADLLSRVH RQVARLGEQR GITIELTTVG GVVQADAERL
QQVLLIALDN ALRHTPSGGT ITLAAAPTGR MVQITVTDTG SGIAPEHLPH IFERFYRADP
ARGRENGNAG LGLSIAKGLV EAMHGRITVT SALGAGTTVS VALPQGETTV AANDL
|
|---|
| |