| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0226 |
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| Symbol | |
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| ID | 5537688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 283406 |
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| End bp | 284323 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640892390 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_001430377 |
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| Protein GI | 156740248 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.965789 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.907816 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGCTT TTCTCGACGG CAACGACGAT GCGGCGACGA GGACGCTGCG CGCGGTCCCG
CGCTGGTTCG CTGAATGGGA GCGCATCCTG AGCCGCTTCC GCAGCGACAG TGAACTCTCG
GCGCTCAACA CGCGGGCTGG CGAGGGATGG GTGCGCGCCA GCCGCACGCT GTGGGAAGTG
CTGAACGACG CACTTGTGGC AGCGCGTCTC AGCGATGGTC TGGTGACGCC GACCGTGTTG
ACGGCGCTAG AGGCGACTGG CTACGACCGG GATTTTGCGC AGATCGCCGC TGGCGCTCCG
GCACAATCAT CGGCGAGCCT CCCGGCGTCC GGCGACTGGC GCGCCATCCG GCTCGACCCA
CAGCGACGCA CAGTGGCATT GCCGCCGGGA ATGCGCCTCG ATCTGAACGG CGTCGCCAAA
GGGTGGGCGG CAACCCGAGC AGCGCAGCGG TTGGCGGCGC ACGGACCGGC GCTCGTCGAT
GCTGGCGGCG ATATTGCGGT GCGAGGCGCG CGCGCCGGTG GAGAGCCATG GGCTATCGGC
ATCGCCAATC CGTTTCAACC GGATGTGCCG CTTGATGTCG TGCTGCTAAC GGACGGCGGC
GTTGCGACAT CAGGACGTGA TGTGCGGCGC TGGCGGCAGG GAAGCGTCGA ACGGCATCAC
ATTATCGATC CGCGCACCGG CGCGCCGGCT GAGACCGACG TGCTGGCAGT GACGGTCATC
GCGCCGTCTC TGTTCGAAGC AGAAGTTGCT GCGAAAGTGG TCGTCATTTT GGGAAGCGTA
GCAGGCATGG AGTGGCTATC CGCCCGCCCG TGGCTTGCCA GTCTGATTGT AACCGATGCG
CAAGAAGTCT TGCACACCGC GACATTTGAA CAGTTCCGCT GGCATGAGCC AGAAGATATG
GAGGTGGTCT ATGAGTGA
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| Protein sequence | MHAFLDGNDD AATRTLRAVP RWFAEWERIL SRFRSDSELS ALNTRAGEGW VRASRTLWEV
LNDALVAARL SDGLVTPTVL TALEATGYDR DFAQIAAGAP AQSSASLPAS GDWRAIRLDP
QRRTVALPPG MRLDLNGVAK GWAATRAAQR LAAHGPALVD AGGDIAVRGA RAGGEPWAIG
IANPFQPDVP LDVVLLTDGG VATSGRDVRR WRQGSVERHH IIDPRTGAPA ETDVLAVTVI
APSLFEAEVA AKVVVILGSV AGMEWLSARP WLASLIVTDA QEVLHTATFE QFRWHEPEDM
EVVYE
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