Gene Rcas_0224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0224 
Symbol 
ID5537686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp281852 
End bp282343 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content57% 
IMG OID640892388 
Producthypothetical protein 
Protein accessionYP_001430375 
Protein GI156740246 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.994888 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.521983 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAT CCATTCAACA GCGAACAACG TCACTCGACG CGCGACGAAT TGCTGCCGGT 
GTGCTGGCAG GCATGATGGG TCTCGTGCTG CTCATCCAAT TCATTCCCTA CGGGCGTGAC
CATACCAATC CGCCGGTGAT CGCCGAACCG TCGTGGGACA ATCCACAGAC ACGCGCGCTG
TTCTTCCGTG CCTGCGCCGA TTGTCACAGC AATGAGACGA CGTGGCCCTG GTACAGCAAT
ATCGCTCCCG CGTCGTGGCT GATCACCCGT GATGTCATGA AAGGTCGTGC AGAGTTCAAC
GTTTCCGAAT GGGGACGACC GGACAACGAA GGAGATGATG CAGCAAAACT GGTACAAAAC
GGCGAAATGC CGCCCTGGTT CTACCTGCCG CTCCATCCCG AAGCCAATCT TTCGCCCGTC
GAACGGCAGC AACTGATCAA TGGACTGCTG GCGACGTTCG GTGGCGAAGC GGAACGAGAG
GATGAAAAGT AA
 
Protein sequence
MTTSIQQRTT SLDARRIAAG VLAGMMGLVL LIQFIPYGRD HTNPPVIAEP SWDNPQTRAL 
FFRACADCHS NETTWPWYSN IAPASWLITR DVMKGRAEFN VSEWGRPDNE GDDAAKLVQN
GEMPPWFYLP LHPEANLSPV ERQQLINGLL ATFGGEAERE DEK