Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0203 |
Symbol | |
ID | 5537664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 249681 |
End bp | 250685 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640892366 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_001430354 |
Protein GI | 156740225 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.387989 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGGAA CAAACGACTA TACCCATGCG TATAGCGGCG CGCGCGTGCT CATTACAGGC GGAATGGGGT TCATCGGTTC GAATCTGGCG CATCGCCTGG TGGAACTCGA TGCGCAGGTG ACTCTGGTCG ACTCACTCAT CCCGATCTAC GGCGGCAATC AGCGCAACAT CGCCGGCATC GAGCATCGGG TGCGCGTCAA CATCGCCGAT GTGCGCGACG AGTATTCGAT GAACTATCTG GTGCAAGGGC AGGATTACCT CTTCAATCTT GCCGGTCAGA CGTCGCACCT GGACTCGATG ACCGACCCCT ATACCGATCT TGAGATCAAC TGCCGCGCGC AGTTGTCGAT CCTCGAAGCC TGTCGCAAGC ACAATCCCAA CCTGAAACTG GTGTACGCTT CGACGCGCCA GATCTATGGC AAGCCGGATT ATCTGCCGGT CGATGAGCGC CACCTGCTCC ATCCGGTCGA TGTCAATGGC GTCAACAAAA TGGCCGGCGA GTGGTACCAT ATTCTCTACA ATAACGTCTA TAGCATTCGC GCATGCGCCC TGCGCCTGAC GAACACCTAT GGTCCGCGCA TGCGCGTCAA AGATGCGCGA CAAACGTTTC TCGGCATCTG GATCAAGCGC CTGATTGACG AAGAGCCGAT CCAGGTCTTC GGCGACGGGT CGCAGATCCG CGACTTCAAC TACGTTGATG ATGTGGTCGA AGCGATGCTG CTGGCAGGCG CATCGCCTGC GGCGGATGGC GGCATCTTCA ATCTGGGCAG CGACGAAACG ATCAACCTGC GCGACCTGGC GGCATTGCTG GTCGAAATTA ATGGCGGCGG CAGTTTTGAA ATTGTGCCTT TCCCACCAGA CCGCAAAGTC ATCGACATCG GCGATTATTA CGCCGATTAC CGCATGATCC AGGGGCGGCT CGGCTGGCGC CCCAAAGTGT CGTTGCGCGA GGGATTGCGC CGTACTCTCG AGTTCTATCG GCGTGAGCGC GAGTATTACT GGTAG
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Protein sequence | MPGTNDYTHA YSGARVLITG GMGFIGSNLA HRLVELDAQV TLVDSLIPIY GGNQRNIAGI EHRVRVNIAD VRDEYSMNYL VQGQDYLFNL AGQTSHLDSM TDPYTDLEIN CRAQLSILEA CRKHNPNLKL VYASTRQIYG KPDYLPVDER HLLHPVDVNG VNKMAGEWYH ILYNNVYSIR ACALRLTNTY GPRMRVKDAR QTFLGIWIKR LIDEEPIQVF GDGSQIRDFN YVDDVVEAML LAGASPAADG GIFNLGSDET INLRDLAALL VEINGGGSFE IVPFPPDRKV IDIGDYYADY RMIQGRLGWR PKVSLREGLR RTLEFYRRER EYYW
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