| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0145 |
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| Symbol | |
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| ID | 5537605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 174097 |
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| End bp | 175461 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640892309 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001430298 |
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| Protein GI | 156740169 |
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| COG category | [K] Transcription
[S] Function unknown
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
[COG3055] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAATG ACACCCTGCC ACAACTGAGC GAGCGCGAGC GCGAAATCCT GCGCCTGGTC
GCCACCGGCG CCACCAATCA GCAGATCGCA GCACAATTGA ACATCAGCGC CAATACGGTC
AAGGTGCATT TGCGCAATAT CTTCGGCAAG ATCGGCGTCG CATCGCGGAC CGAGGCGACC
ATGTATGCGG TGCGGAGTGG CATTGTTGAA ATCGCTTCAG TGTCATCAGG CAGCACCGCC
GTGCTGTCCG ATTCAACAAC GTCGGCGATT GACGCTTTAT CAGACCGCGA CGCAGGTGCA
TCGGCATCAG TAGTAACCCG TGCTGTGTTG CGTCCATCAC GATCACGATG GTTGCTCTAT
ACCGGTATTG CAGGGGGAGT AATCCTGGCG TTTGCAATTA TCTTCGGGTT GCTCGTCATG
TCACAGGGAG GCAATTCTCT AACTGCACAG CCAACCGTCG TTCCCACACC ACAGACATTC
ATCTCATCAC CTTCACCAGT CTGGACTCTC CATCCTGCGC TGCCCTACGC GCAGCGAGCG
TCTGCGGCAG TTTCCTTCGA GGGGCGGATT TTCGTTATTG GCGGCACAAC CGACGGCGGC
GTGACCGGCA GCGTCTGGCG CTATGATCCA TCATCACAGA TATGGGCGCC ACTCAATGCC
AAGCCGACGC CGGTGCGGGA TGCTGGCGCC GTCGTGCTGA ACGGCAAAAT CTACGTTCCT
GGCGGTCGCC TGGCAGACGG GAACATTACC GACAAACTGG AAGTCTTCGA TCCGGCGCTT
GGGGCGTGGT CCGAACGGCG TTCGCTGCCT GCACCCCGAA GCGCTTATGC ACTTGCAGCA
GTTGATGGTC GCCTCTACCT GTTTGGTGGT TGGGATGGCT CGAAGATCTG CGATGACGTT
TTTGCCTACG ATCCTGTCAG CGACACGTGG GAGCGTCGTC CATCGATGCC GACGGCGCGC
GCCTATGCGG GTGCGTCGGT CGTTGATGGC AATATCTACG TTATTGGCGG CGAAGACCAG
AGTGGCGCAT TGACCGTCAA CGAACAATAT GCGCCATCAA AGGAAGGGGA CGCTGCGTGG
TCGCAACGTG CAGCGCTGCC TGAGGCGCGG AGCCGCTTTG GTTCCGCAGC GCTCTCGAAC
CTGATCTTCG TTTTGGGAGG CGTCCCAGAA GATAGCCCGT TGTACTACGA TGTCCGCAAC
GATGGGTGGA GAGCATTTGC CGTCTCGCAA ACGCCGCTAG GCGAGCAACC CGCCGTCGCA
GTGCGTGATG CATCGTTGTT TGTCGTGAGC AGTAGTCGCA ACCAGAGCAA CAGTCCAATG
CAGGAGTTGC GTATGCTCTA CACAGTGGTT TTGCCAGCAC AGTAG
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| Protein sequence | MSNDTLPQLS EREREILRLV ATGATNQQIA AQLNISANTV KVHLRNIFGK IGVASRTEAT
MYAVRSGIVE IASVSSGSTA VLSDSTTSAI DALSDRDAGA SASVVTRAVL RPSRSRWLLY
TGIAGGVILA FAIIFGLLVM SQGGNSLTAQ PTVVPTPQTF ISSPSPVWTL HPALPYAQRA
SAAVSFEGRI FVIGGTTDGG VTGSVWRYDP SSQIWAPLNA KPTPVRDAGA VVLNGKIYVP
GGRLADGNIT DKLEVFDPAL GAWSERRSLP APRSAYALAA VDGRLYLFGG WDGSKICDDV
FAYDPVSDTW ERRPSMPTAR AYAGASVVDG NIYVIGGEDQ SGALTVNEQY APSKEGDAAW
SQRAALPEAR SRFGSAALSN LIFVLGGVPE DSPLYYDVRN DGWRAFAVSQ TPLGEQPAVA
VRDASLFVVS SSRNQSNSPM QELRMLYTVV LPAQ
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