| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0127 |
|---|
| Symbol | |
|---|
| ID | 5537587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 154198 |
|---|
| End bp | 154959 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640892292 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001430281 |
|---|
| Protein GI | 156740152 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4813] Trehalose utilization protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTAGACT CGTGGTGCGT TGTGAGACGA AAGGATAGCA TTGTGACACC CATTCGCGTC
GCCGTCTGGA ACGAATTCCG TCACGAGCAG GATAGCCGCC ATCCTGCAAG CAGCATCTAT
GGCGCGCAGG GGATTCACGG CGCAATTGCC GAAGGTCTCC GCGAGCACGG CGGCTTCGAG
GTGCGCACCG CCACGCTCGA TGAGCCGGAG CACGGGTTGT CCGATGATGT GCTGGCAACC
ACCGATGTGC TGATCTGGTG GGGTCATATG GCGCATCATT TGGTGCAGGA CGCCGTTGTC
GACAGAGTCC ATGCCCGCGT GCTCGATGGC ATGGGGCTGA TCGTGCTGCA CTCCGGTCAC
TTCTCGAAGA TTTTCCGCAA ACTGATGGGC ACAACCTGCG ATCTGAAGTG GCGCGAGGCA
GACGATATCG AGCGCATCTG GGTGGTCGAG CCGGGGCATC CGATTGCCGC CGGTCTCGAT
GAGTGCTTTG AACTGCCGGA GGAGATGTAC GGCGAACGGT TCGACATCCC GGCGCCGGAG
CAACTGGTGT TCATCAGTTG GTTTACCGGC GGCGAGGTGT TTCGCAGCGG TTGCTGCTAC
ACTCGCGGGC GCGGCAAAAT CTTCTACTTC CGCCCCGGGC ACGAGTCCTA CCCGACCTAC
CGCGACTCAA ATGTGCGCCG GGTGATTGCC AACGCCGTGC GTTGGGCGGC GCCGTCCGGC
GGTCCAAAAC CGGTGTTCGG GAACGCAAAG CCGAGGAGTT AG
|
|---|
| Protein sequence | MLDSWCVVRR KDSIVTPIRV AVWNEFRHEQ DSRHPASSIY GAQGIHGAIA EGLREHGGFE
VRTATLDEPE HGLSDDVLAT TDVLIWWGHM AHHLVQDAVV DRVHARVLDG MGLIVLHSGH
FSKIFRKLMG TTCDLKWREA DDIERIWVVE PGHPIAAGLD ECFELPEEMY GERFDIPAPE
QLVFISWFTG GEVFRSGCCY TRGRGKIFYF RPGHESYPTY RDSNVRRVIA NAVRWAAPSG
GPKPVFGNAK PRS
|
|---|
| |