Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0122 |
Symbol | |
ID | 5537582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 144595 |
End bp | 145233 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640892287 |
Product | formiminotransferase-cyclodeaminase |
Protein accession | YP_001430276 |
Protein GI | 156740147 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3404] Methenyl tetrahydrofolate cyclohydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGATA GACTTCTTGA GACGACGGTC GGTCAGTTCC TTGATCGCCT CGCCAGTAGC GCGCCGACGC CGGGCGGCGG GAGTGTGGCG GCGCTCACCG GTGCGATGGC GGCTGGTCTG ATTACGATGG TGTGCGACCT GACAATCGGC AAGAAGCAGT ACGCCGAGTT CGAGGCGGAA GCGAAAGCCA TTCGCGAGCG CGCGGAAGCG TACCGCGCCG AACTCCAGCA GTTGGCGCAG GCGGATATTG ATGTGTTCAA TCAGTTGTCG GCGGTCTACA AATTGCCGCG CACCACCGAA GCGGATGCGG CAAGCCGTAG GGCTGCGATT CAGACCGTCA TGCGGCAGGC GACCGAGATT CCACTCCGTA CTGCGCGCGC CGCTGCCGCA TTGCTGCCGC TCTGTGCGCC GCTTGCGCGC TATGGAAACC GCACCGCAGT CACCGACGTC GCTGCGGCTG CGCTCCTGAT TCGCGCAGCG GTTCCGGCGG CATTGATCAA TGTCGAAAGC AATCTGGCGG TGATCGAAGA TCAGATCTTT GCGCGAGAGG CGCGCGCTCA GGCGGAAGAT CTGCTGATGG GCCTCGATGG CGAGGTGGAG GGGGTACTGA CGTTGACGCG AACTCGTCTC AAAGGGTAA
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Protein sequence | MSDRLLETTV GQFLDRLASS APTPGGGSVA ALTGAMAAGL ITMVCDLTIG KKQYAEFEAE AKAIRERAEA YRAELQQLAQ ADIDVFNQLS AVYKLPRTTE ADAASRRAAI QTVMRQATEI PLRTARAAAA LLPLCAPLAR YGNRTAVTDV AAAALLIRAA VPAALINVES NLAVIEDQIF AREARAQAED LLMGLDGEVE GVLTLTRTRL KG
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