Gene Rcas_0122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0122 
Symbol 
ID5537582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp144595 
End bp145233 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content63% 
IMG OID640892287 
Productformiminotransferase-cyclodeaminase 
Protein accessionYP_001430276 
Protein GI156740147 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3404] Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATA GACTTCTTGA GACGACGGTC GGTCAGTTCC TTGATCGCCT CGCCAGTAGC 
GCGCCGACGC CGGGCGGCGG GAGTGTGGCG GCGCTCACCG GTGCGATGGC GGCTGGTCTG
ATTACGATGG TGTGCGACCT GACAATCGGC AAGAAGCAGT ACGCCGAGTT CGAGGCGGAA
GCGAAAGCCA TTCGCGAGCG CGCGGAAGCG TACCGCGCCG AACTCCAGCA GTTGGCGCAG
GCGGATATTG ATGTGTTCAA TCAGTTGTCG GCGGTCTACA AATTGCCGCG CACCACCGAA
GCGGATGCGG CAAGCCGTAG GGCTGCGATT CAGACCGTCA TGCGGCAGGC GACCGAGATT
CCACTCCGTA CTGCGCGCGC CGCTGCCGCA TTGCTGCCGC TCTGTGCGCC GCTTGCGCGC
TATGGAAACC GCACCGCAGT CACCGACGTC GCTGCGGCTG CGCTCCTGAT TCGCGCAGCG
GTTCCGGCGG CATTGATCAA TGTCGAAAGC AATCTGGCGG TGATCGAAGA TCAGATCTTT
GCGCGAGAGG CGCGCGCTCA GGCGGAAGAT CTGCTGATGG GCCTCGATGG CGAGGTGGAG
GGGGTACTGA CGTTGACGCG AACTCGTCTC AAAGGGTAA
 
Protein sequence
MSDRLLETTV GQFLDRLASS APTPGGGSVA ALTGAMAAGL ITMVCDLTIG KKQYAEFEAE 
AKAIRERAEA YRAELQQLAQ ADIDVFNQLS AVYKLPRTTE ADAASRRAAI QTVMRQATEI
PLRTARAAAA LLPLCAPLAR YGNRTAVTDV AAAALLIRAA VPAALINVES NLAVIEDQIF
AREARAQAED LLMGLDGEVE GVLTLTRTRL KG