Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0105 |
Symbol | |
ID | 5537564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 125516 |
End bp | 126634 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640892269 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001430259 |
Protein GI | 156740130 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
TIGRFAM ID | [TIGR01836] poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.729703 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACGT CGCCTGAGAC GACGCTCTTT CCCGTAGATC CGGCGACAGT GGCGAAGAAC CTGTACGCCG AAGTTGAACG TTTGGGGAAA GCCTATGAAA TGGGCGTCAA GATCGCCACG GGAAAACAAC GGGCAAAGGT GGCGCAGACG CCAAAAGAGG CGATCTGGAC GCTCAATAAG ACCACTCTGT ATCATTACTA CCCGCAGGCG CCGGCGGAGA AGCGCAAACG GGTGCCGTTG CTGCTCGTCT TTGCGTTGAT CAATAAGCCC TACATCTTCG ACCTGCGCCC AGGCAACAGC TTCGTCGAAT ACATGGTTCA GCAGGGGTAC GACGTCTACC TGGTCGATTG GGGCGCCCCC GGTCCAGAAG ATGCGCACCT GACGTTCGAT GATTATGCGC TCGAGTATCT GCCGCGTGCG GTGCGCCGCA TGCAGATGCA CAGCGGGCAG CGCGATTTCA GTATGCTCGG TTGGTGCATC GGTGCAACGC TTGCAGCGAT CTATGCGGCA ATGCGCCCGG ACGACGGTCT GCGCAATCTG ATCCTGCTGA CGGCGCCGAT TGATTTTTCC AACAAGGGCG CGATGGGTCC GTTTCCCAAG TGGCTGAAGG AGGAATATTT CAACCTCGAC GCCATTCTGG AGCAGACGGG CAACTACCCT GGCGAAATGA TCGATGTCGG CAGCAAACTG CTCAAGCCGG TCGAAAATCT GGTTGGTAAT TACCTGCGCT TGCTCGATAA CCTCGATGAC CCGAAGATCG TCGAGTCGTG GCAGGCGATG AATACCTGGG TGAGCGATGG GGTGCCGTTT GCTGGCGCTG CCTATCGTCA ACTGGTCGTC GATCTCTACC GCGAAAATCG GTTGATGAAC GGTACCTGGA TCATGCGCGG GCGCCCGGTC AACCTGGGAG ACATCAAAGC GTCGCTGCTC AACATTATCG CGCGGCAGGA TCATATCGTC CCGCCGTGCC AGTCGGAAAC CATCCTGGAT CGCGTGAGCA GCATCGATAA ACATCAGATC ATTATGCCAG GCGGTCATAT CGGTATTATG GCTGGCAGCG GGGCGCGTCG TGGTCTGTGG CCGCAAATCG ATGCCTGGCT CGCCGATCGA TCGATCTAA
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Protein sequence | MTTSPETTLF PVDPATVAKN LYAEVERLGK AYEMGVKIAT GKQRAKVAQT PKEAIWTLNK TTLYHYYPQA PAEKRKRVPL LLVFALINKP YIFDLRPGNS FVEYMVQQGY DVYLVDWGAP GPEDAHLTFD DYALEYLPRA VRRMQMHSGQ RDFSMLGWCI GATLAAIYAA MRPDDGLRNL ILLTAPIDFS NKGAMGPFPK WLKEEYFNLD AILEQTGNYP GEMIDVGSKL LKPVENLVGN YLRLLDNLDD PKIVESWQAM NTWVSDGVPF AGAAYRQLVV DLYRENRLMN GTWIMRGRPV NLGDIKASLL NIIARQDHIV PPCQSETILD RVSSIDKHQI IMPGGHIGIM AGSGARRGLW PQIDAWLADR SI
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