| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0104 |
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| Symbol | |
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| ID | 5537563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 124743 |
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| End bp | 125483 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640892268 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001430258 |
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| Protein GI | 156740129 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.650868 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTGA AAGATAAGGT GGCAATTGTG ACCGGTGCGG GCCACGGCAT TGGCAAAGCG
ACTGCGATTG CCTTCGCGCG CGAGGGCGCG CGCGTTGCCG TCGTCGATAT CAATATGGCC
GGCGCCGAGG CGACGGTGGC TGAAATTACC AGACAGGACG GACGCGCGAT CGCCGTCCAG
GCCGATGTCT CTCAGGCGGC ATCGGTGGAG TCGATGGTTG AGACGGTGCT GGCATGGGGT
GGGCGGATCG ATGTGCTGCT CAATAATGCC GGCATTACGC GCGATGCGCG CCTGGTGAAA
ATGACCGAAC AACAGTGGGA CGCCGTGATC AATGTCAATC TCAAAGGCGT CTGGCTGTGT
GCGCGAGCAG TGGCGCCGCA TATGACCGCG CAGGGCAGCG GGTCGATTAT CAATGTCAGC
TCGATTGTCG GTCTGTACGG CAACTTTGGT CAGTCGAACT ATGCTGCCAC CAAAGGTGGC
GTCATTGCGA TGACCAAGAC CTGGGCGCGT GAACTTGGTC CCTCCGGTGT GCGTGTCAAT
GCGGTGACTC CTGGCTTTAT CGCCACTGAG ATGATCAGTA CAATTCCCGA AAAGGTGATC
CATACGGTTC AGGAACGCAC GCCGCTGCGT CGCCTTGGCA AGCCGGAAGA GGTCGCCGCC
GTGTACATCT TCCTCGCATC GGACGACTCG AGTTTCGTTA CCGGTTCGGT CATTCAGGTA
GACGGCGGTT TGCTCTGGTA G
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| Protein sequence | MRLKDKVAIV TGAGHGIGKA TAIAFAREGA RVAVVDINMA GAEATVAEIT RQDGRAIAVQ
ADVSQAASVE SMVETVLAWG GRIDVLLNNA GITRDARLVK MTEQQWDAVI NVNLKGVWLC
ARAVAPHMTA QGSGSIINVS SIVGLYGNFG QSNYAATKGG VIAMTKTWAR ELGPSGVRVN
AVTPGFIATE MISTIPEKVI HTVQERTPLR RLGKPEEVAA VYIFLASDDS SFVTGSVIQV
DGGLLW
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