Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0101 |
Symbol | |
ID | 5537560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 122003 |
End bp | 122716 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640892265 |
Product | DtxR family iron dependent repressor |
Protein accession | YP_001430255 |
Protein GI | 156740126 |
COG category | [K] Transcription |
COG ID | [COG1321] Mn-dependent transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGCTG ACACAACTCG ACACGCCAGA GCACGACGCA AACCGGGCGA CGCCGGACCA ACCGAAAAGA TGCGCGAGTA TCTGGAGGTT ATCTATTACC TGGCGGCGCG TGGCGAACCG GTTATCAGCG CGCGGTTGGC GGAATGGATG CATGTGACCC CCCCAACTGT CGCCGATATG GTGAGCCGTA TGGAGGATCG CGGCTATATC GTGCGCGATG GGCGCGGTGA GATTTTGCTG ACCGACGAAG GGTTTCGTCT GGCGGAAGCC ATGGTACGGC GACACCGCAT TCTGGAGCGT TTCCTCGTCG ATGTGATGGG CATGCAGTGG CACGAAATTC ACGAGGAAGC GGTGCGCCTC GAACACGCGC TCTCGCCGCG TCTGGAAGAA CGGATCGAGG AACTGGTCGG CGAGGCGACC ACGTGCCCGC ACGGCAATCC CATTCCTGGA CGTTGCGACG TCTATGCCGG CACGGTGCGC CTCGATCAGG CGACTCCTGG CGGCGTCTTT ACCCTGCGGC GCATCGCGGA AGAGGCAGAA GAAGATACGG TGCTGATTCG GTACTTACAG AACAGCCATC TGGTGCCGGG TGAGCAGTTT GCTGTGATTG ATGTCTCTCC GGTGTACGGC GTCACGCTTC AACGCGATGA CCGGCAGATT ACCCTTTCGC CGCAGATCGC CGCCTACCTC TGGGGCGACG TGACGCCTAC TTAA
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Protein sequence | MMADTTRHAR ARRKPGDAGP TEKMREYLEV IYYLAARGEP VISARLAEWM HVTPPTVADM VSRMEDRGYI VRDGRGEILL TDEGFRLAEA MVRRHRILER FLVDVMGMQW HEIHEEAVRL EHALSPRLEE RIEELVGEAT TCPHGNPIPG RCDVYAGTVR LDQATPGGVF TLRRIAEEAE EDTVLIRYLQ NSHLVPGEQF AVIDVSPVYG VTLQRDDRQI TLSPQIAAYL WGDVTPT
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